CF836487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_PICTO (50S ribosomal protein L11P OS=Picrophilus torridus GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 56/158 (35.44%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 103 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 564 +V V V GG+ L P +GPLGL+ ++ +DI ++T K++ G++V V + V + K + VP +AL+ K L + KK + I GN TL+ + ++A+ R ++ ++ G V E+LG+ VS+G TVDG+DPK++Q+ I +G++EI Sbjct: 1 MVAVKTMVEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPATKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METHJ (50S ribosomal protein L11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ---AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 V V V GG+ A L P +GPLG++ K + ++I K+TA + G++V V++ V ++ V + P+ A ++ +A E TK + G++ L+ + IAK+ ++ DL VKE++GTCVS+G TV GK PKD+ +EI G Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDEINKKTAS-FNGMQVPVRVEVDEKKNFTISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_UNCMA (50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 V V V GG+ L P +GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R V V P +ALV+ LK + T N G++T++ I++A++ R ++ L VKE+ GTCVS+G ++GK PK+ E+ G Sbjct: 5 VEVLVPGGKANPGPPLGPALGPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFTVEVGTPPTSALVLSELKLEKGSG--TPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METTH (50S ribosomal protein L11P OS=Methanobacterium thermoautotrophicum GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 52/150 (34.67%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 V + + GG+ L P IGPLG++ ++ E+I ++TA D++G++V VK+ V R +V V P AL++ LK + + + +I+++ V++IA++ ++ D VKEI+GTCVS+G TV+GKDP+++Q+E+ G Sbjct: 6 VEILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDFEVEVGTPPTTALIMDELKLEKGSQDP--GMDKIADISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METM7 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 55/157 (35.03%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 100 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 561 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G PK+ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METM6 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 55/157 (35.03%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 100 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 561 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G PK+ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METS5 (50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 61/154 (39.61%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 + V V GG V LAP + LGL+ +GE + K E +KG+ V V L V K V VP+ +L++K P D + K GNI++DDVIE+A +P AK+L G VK ILGT S+G TVD KDPK + +E+ +G Sbjct: 6 IKVVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTKKYEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI----GNISMDDVIEVAISKKPSLTAKELKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METMJ (50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 53/152 (34.87%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 561 V V V GG+ A L P +GPLG++ K + +DI K+TA ++ G++V V +TV +++ V P ALV+K + + + G++ L+ + IA++ ++ DL VKE+LGTCVSVG TV+GK P+++ Q + +G+ + Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFTIEVGIPPTTALVMKEAGITKGSTEPGALVA--GDLPLEAAVRIARMKFDGMLSYDLKSAVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METPE (50S ribosomal protein L11P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17 Identity = 53/156 (33.97%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPLD 573 V V V GG A + P +GPLG++ K + +DI K+TA ++ G++V VK+ V +++ ++V +P ALV+K + + + I G++ ++ + IA++ ++ +L VKE++GTCVSVG TVDGK PK++ I+ G + L+ Sbjct: 5 VEVLVPGGRATAGPPIGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVTISVGIPPTTALVMKEVGIEKGSAEPNSIIV--GDLPIEAAVRIARMKLDDMLSYELKTAVKEVIGTCVSVGVTVDGKKPKEILAAISAGQYDSVLE 157
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METMP (50S ribosomal protein L11P OS=Methanococcus maripaludis GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17 Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 100 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 561 QVV++ V +GG+ A L P IGPLG++ ++ + I T KD++G+ V VK+ V + V +P A+AL+ K + K ++ KH GNIT++ +++IAK+ + +A +L KE++GTCVSVG +V+G P + Q+ I G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTDKRTFEVEVGIPPASALIKKEIGI----EKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155 The following BLAST results are available for this feature:
BLAST of CF836487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836487 ID=CF836487; Name=CF836487; organism=Citrus sinensis; type=EST; length=709bpback to top |