CF836487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METS3 (50S ribosomal protein L11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14 Identity = 42/150 (28.00%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 V + + GG L P +GP G++ ++ E+I ++A D+ G++V VK+++ + + P +L+++ L + + +I ++ +D ++IA++ +A D VKE++GTCVS+G +VDGKDP++ Q+++ G Sbjct: 6 VEILIEGGSATPGPPLGPALGPFGINMMQVVEEINNKSA-DFAGMKVPVKVSIDRDTKEFEIEIGTPPTTSLIMEELGIEKASHEPGADIV--ADLPIDKALKIARMKFDSLLANDYKAGVKEVMGTCVSMGLSVDGKDPREAQKDVDAG 152
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_METBU (50S ribosomal protein L11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14 Identity = 43/145 (29.66%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 124 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 + GG+ L P +GPLG++ K + E I ++T KD+ G++V VK+ V + + ++ V P +AL++K L + + + GN+ + V +IA++ + ++ L +KE++GTCV +G T++ DP++ Q+ + +G Sbjct: 9 IPGGKANPGPPLGPALGPLGVNIKDVIEKINEKT-KDYNGMQVPVKVIVNDDKSVEIEVGTPPTSALILKELNIEKGSGESGTVVV--GNLEIAQVAKIARMKKDDILSYSLKAAIKEVMGTCVPMGVTIENLDPRECQKAVDEG 150
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_SULTO (50S ribosomal protein L11P OS=Sulfolobus tokodaii GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALK--EPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 + + V GG V LAP + LGL+ +GE + K + +KG+ V V L V K + +P+ +L++K EP D K G+I +D+I++A + +P+ AK L VK ILGT S+G TVD K PK+L + + +G Sbjct: 6 IKIVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINDATSQFKGMSVPVTLEVDTDTKKYEIKVGIPTTTSLLLKFANASEPSGDPAHKKV----GDIKFEDIIQVAIMKKPQITAKTLKAAVKSILGTAHSIGLTVDKKSPKELVKAVDEG 152
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: YD417_YEAST (Putative uncharacterized protein YDR417C OS=Saccharomyces cerevisiae GN=YDR417C PE=5 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = -3 Query: 66 FWTVSLTVTRKPFQSLAVSLAMSSPIFLGERPRGPIFGARELAAPTSPPVTRTYTSTTWLGSNFGGMIAL 275 FW + TVT P SL V+LA+SSP F G++P GPIFGA+ APTSPP Y T GSNFGG++ + Sbjct: 39 FWIFNWTVTLIPLNSL-VALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSNFGGILTI 107
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_NANEQ (50S ribosomal protein L11P OS=Nanoarchaeum equitans GN=rpl11p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 45/152 (29.61%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 106 VDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 552 + + + VTGG+ + P + P ++P K+ +I K T K+++GL V V++ + + ++ K+ V +P +AL++KA ++ + GN+++ DV+EIAK L VK +LGT + G V+ KDPK++ +E+ +G Sbjct: 4 IAIRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLT-KEYEGLPVPVEIIINPETKEYKIIVGLPPTSALLMKAAGVTRGPQRTVH--EWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEG 152
BLAST of CF836487 vs. ExPASy Swiss-Prot
Match: RL11_HALMA (50S ribosomal protein L11P OS=Haloarcula marismortui GN=rpl11p PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 42/152 (27.63%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK-DWKGLRVTVKLTVQNR-QAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 561 + V V GGE L P++GP + + + ++I +TA D + VTVK + +V V P+A + +A E + + ++++D V +IA+ P ++ DL+ KE++GTC S+G T++G++P++ ++ I G+ + Sbjct: 5 IEVLVPGGEANPGPPLGPELGPTPVDVQAVVQEINDQTAAFDGTEVPVTVKYDDDGSFEIEVGVPPTAELIKDEAGFETGSGEPQEDFV---ADLSVDQVKQIAEQKHPDLLSYDLTNAAKEVVGTCTSLGVTIEGENPREFKERIDAGEYD 153 The following BLAST results are available for this feature:
BLAST of CF836487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836487 ID=CF836487; Name=CF836487; organism=Citrus sinensis; type=EST; length=709bpback to top |