CF836600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29 Identity = 60/101 (59.41%), Postives = 78/101 (77.23%), Query Frame = -1 Query: 419 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 712 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR YL+LP EIVPATL++ T Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET 101
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10B_DROME (40S ribosomal protein S10b OS=Drosophila melanogaster GN=RpS10b PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 7.217e-28 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = -1 Query: 425 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAK 712 M +P+ +R I +YLF+EGV AKKD++ KHPE++ +PNL VIK MQS S+ V+E FAW HYYWYLTNEGIE LR YL+LP EIVP+TLK+ A+ Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPAR 97
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10_XENLA (40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28 Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = -1 Query: 419 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 712 M++P+K+R I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+YWYLTNEGI++LR +L+LP EIVPATL++ T Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET 101
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10B_SCHPO (40S ribosomal protein S10-B OS=Schizosaccharomyces pombe GN=rps10b PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 55/97 (56.70%), Postives = 76/97 (78.35%), Query Frame = -1 Query: 422 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 712 M+IP++NR+ I + LFQ+GV AKKD+NL KHPE+ VPNLQVIK QS S+ Y++ + W +Y+ LTNEG+E+LR YL+LP+E+VPAT K+Q +P Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRP 97
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10A_SCHPO (40S ribosomal protein S10-A OS=Schizosaccharomyces pombe GN=rps10a PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27 Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = -1 Query: 419 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 712 M+IP++NR+ I + LF +GV AKKD+NL KHPE+ VPNLQVIK QS S+ Y++ + W +Y+ LTNEG+E+LR YL+LP+E+VPAT K+Q +PT Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPT 98
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10_DICDI (40S ribosomal protein S10 OS=Dictyostelium discoideum GN=rps10 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 1.042e-26 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = -1 Query: 428 IIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQA 709 +IP +N+ I +YLFQEGV A KD++LAKHP+I+ V NL V+++++SFKS+++V ETF W +YYW LT EGI++LR YL +P +VPAT+KKQA Sbjct: 3 LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFNWQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 97
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10L_HUMAN (Putative 40S ribosomal protein S10-like protein OS=Homo sapiens GN=RPS10P5 PE=5 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 57/94 (60.64%), Postives = 73/94 (77.66%), Query Frame = -1 Query: 440 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATL 712 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KS+ V+E FAW H+YWYLTNEG ++LR YL+LP EIVPATL Sbjct: 1 MLMPKKNRIAIHELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGCVKEQFAWRHFYWYLTNEGSQYLRDYLHLPPEIVPATL 94
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10A_YEAST (40S ribosomal protein S10-A OS=Saccharomyces cerevisiae GN=RPS10A PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = -1 Query: 419 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 712 M++P+++R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS SK YV+ F+W +YY+ LT EG+E+LR YLNLP IVP T ++ PT Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPT 98
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10A_DROME (40S ribosomal protein S10a OS=Drosophila melanogaster GN=RpS10a PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.960e-26 Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = -1 Query: 425 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAK 712 M IP+ NR I +YLF+EGV AKKD + KH E+D +PNLQVIK+MQS S+ +V+E FAW H+YW LTNEGIE LR YL+LP EIVP+TL + + Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97
BLAST of CF836600 vs. ExPASy Swiss-Prot
Match: RS10B_YEAST (40S ribosomal protein S10-B OS=Saccharomyces cerevisiae GN=RPS10B PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.755e-26 Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = -1 Query: 419 MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 712 M++P++ R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS SK YV+ F+W +YY+ LT EG+E+LR YLNLP IVP T ++ P+ Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPS 98 The following BLAST results are available for this feature:
BLAST of CF836600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836600 ID=CF836600; Name=CF836600; organism=Citrus sinensis; type=EST; length=796bpback to top |