CF836604

Overview
NameCF836604
Unique NameCF836604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 81/172 (47.09%), Postives = 96/172 (55.81%), Query Frame = -2
Query:  175 RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIRGS-GKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCT--GSNYLLTFC 675
            R WGR GC F+A+GRG C TGDCGG   C G  G PP TLAE  L Q    DF+D+SLVDG+NI M+  P + S GKC    C + +N  CP  L+V        C + C  F   +YCCT        C PT  S+ FK  CP AYSY  DDPTS  TC    +NY + FC
Sbjct:   65 RIWGRTGCNFNAAGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFC 225          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 81/172 (47.09%), Postives = 96/172 (55.81%), Query Frame = -2
Query:  175 RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIR-GSGKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCTG--SNYLLTFC 675
            R WGR  C FD +GRG C TGDCGG   C G  G PP TLAE  L Q    DF+D+S++DG+NI MS  P + G GKC    C + +N  CPG L+V        C + C  F   +YCCT        C PT  SR FK  CP AYSY  DDPTS  TCT   ++Y + FC
Sbjct:   66 RIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFC 226          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35
Identity = 81/172 (47.09%), Postives = 96/172 (55.81%), Query Frame = -2
Query:  175 RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQQQ--DFYDVSLVDGYNIAMSILPIRGS-GKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCTG--SNYLLTFC 675
            R WGR  C F+A+GRG C TGDCGG   C G  G PP TLAE  L Q    DF+D+SLVDG+NI M+  P   S GKC    C + +N  CP  L+V        C + C  F   +YCCT        C PT +S+ FK  CP AYSY  DDPTS  TC G  +NY + FC
Sbjct:   65 RVWGRTNCNFNAAGRGTCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFC 225          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35
Identity = 81/172 (47.09%), Postives = 95/172 (55.23%), Query Frame = -2
Query:  175 RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIR-GSGKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCTG--SNYLLTFC 675
            R WGR  C FD +GRG C TGDCGG   C G  G PP TLAE  L Q    DF+D+S++DG+NI MS  P   G GKC    CV+ +N  CPG L+V        C + C  F   +YCCT        C PT  SR FK  CP AYSY  DDPTS  TC    ++Y + FC
Sbjct:   66 RIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFC 226          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33
Identity = 78/184 (42.39%), Postives = 100/184 (54.35%), Query Frame = -2
Query:  175 KAYTIRLPPLWSG-RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCT-GSNYLLTFC 714
            +++++ +P    G R W R GC FD SGRG C TGDCGG   C    G+PP TLAE  L      DF+D+SLVDG+N+ M   P   +G      C + +N  CP  L+ +       C + C  F + +YCC     N  SC PT YSR FK  CP AYSY  DDP S  TC  G++Y + FC
Sbjct:   30 QSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAY-GAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSP-TSNGCTRGISCTADINGQCPSELKTQG-----GCNNPCTVFKTDQYCC-----NSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFC 201          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32
Identity = 75/171 (43.86%), Postives = 93/171 (54.39%), Query Frame = -2
Query:  175 RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIRGSGKCSYA-GCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATC-TGSNYLLTFC 675
            R W R GC FD +GRG+C TGDC G   C    G PP TLAE  L Q    DF+D+SLVDG+N+AM   P   SG C+    C + +N  CP  L+         C + C  F + +YCC     N  +C  T +S+ FK  CP AYSY  DD TS  TC  G+NY + FC
Sbjct:   67 RVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAF-GQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPT--SGGCTRGIKCTADINGQCPNELRAPG-----GCNNPCTVFKTDQYCC-----NSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFC 224          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30
Identity = 77/184 (41.85%), Postives = 97/184 (52.72%), Query Frame = -2
Query:  175 KAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQQ-QDFYDVSLVDGYNIAMSILPI-RGSGKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCTG-SNYLLTFC 714
            +++TI + P    G+ W R  C FD SGRG C TGDCGG   C   G  PP TLAE +L Q  +D+ D+S + G+N+ M   P  RG   C    C + +   CP  L+         C  AC  F +  YCCT        C PT YSR FK  CP A+SY  D PT++ TC G SNY +TFC
Sbjct:   57 ESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFG-RPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRG---CRGVRCAADIVGQCPAKLKAPGGG----CNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 226          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30
Identity = 76/184 (41.30%), Postives = 98/184 (53.26%), Query Frame = -2
Query:  175 KAYTIRLPPLWSG-RFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQQ-QDFYDVSLVDGYNIAMSILPI-RGSGKCSYAGCVSALNLMCPGGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTVYSRIFKAACPRAYSYAYDDPTSIATCTG-SNYLLTFC 714
            +++TI + P  +G + W R  C FD SG G C TGDCGG   C   G  PP TLAE +L Q  +D+ D+S + G+N+ M+  P  RG   C    C + +   CP  L+         C  AC  F +  YCCT        C PT YSR FK  CP A+SY  D PT++ TC G SNY +TFC
Sbjct:   35 ESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFG-RPPTTLAEFSLNQYGKDYIDISNIKGFNVPMNFSPTTRG---CRGVRCAADIVGQCPAKLKAPGGG----CNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 204          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 55/118 (46.61%), Postives = 69/118 (58.47%), Query Frame = -2
Query:  367 KAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSALNLMCPGG-LQVRSNSRVVAC 714
            + +TI +P    SGR WGR GC FD SGRG CATGDC G+  C  + G  P TLAE T+G  QDFYD+S++DGYN+AMS         CS    V+  +  CP   L    N++  AC
Sbjct:   56 QTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCT-LSGQKPLTLAEFTIGGSQDFYDLSVIDGYNVAMSF-------SCSSGVTVTCRDSRCPDAYLFPEDNTKTHAC 165          
BLAST of CF836604 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = -2
Query:  427 SGRFWGRHGCRFDASGRGRCATGDCGGSFFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGCVSA 681
            +GR WGR GC F+ +GRG CATGDC G+  C   G   PATLAE T+G  QDFYD+S++DGYN+AM      G   KC  +GC  A
Sbjct:   63 AGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGYNLAMDFSCSTGVALKCRDSGCPDA 145          
The following BLAST results are available for this feature:
BLAST of CF836604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OS81_SOLCO6.025e-3647.09Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OLPA_TOBAC6.025e-3647.09Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OSMO_TOBAC1.028e-3547.09Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS35_SOLCO1.028e-3547.09Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
P21_SOYBN2.143e-3342.39Protein P21 OS=Glycine max PE=1 SV=1[more]
TLP_ACTDE9.004e-3243.86Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
THM2_THADA1.698e-3041.85Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA8.427e-3041.30Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
TLP_ORYSJ1.103e-2146.61Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
RST3_AVESA5.666e-1853.49Thaumatin-like pathogenesis-related protein 3 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_03E05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa03E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836604 ID=CF836604; Name=CF836604; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTGATACCAACAAACTACCGTACCATGATATTATT
ACTAGTAAACATAACATAACATATGATATAATAATAATAATCTTATCTAT
TACAAATGAACTTGATAGCGTATGTAGTAGTAGTGGTAAATAATGGGTAT
AAAAATCTAACGGCGATGGCGGGGGCAGAAAGTGAGCAAGTAGTTGCTGC
CGGTGCAAGTAGCAATACTAGTGGGATCATCATAAGCATAGCTGTAAGCT
CTGGGACAAGCGGCCTTGAAAATCCTGGAGTAAACAGTGGGCTTGCAGGA
TTGAGGATTCCCAAAGCTCCCAGTGCAGCAATACCTGGGCGAGTTGAAAG
CGAAACAAGCACTTTTGCAGGCCACCACTCTGCTGTTGGACCTCACTTGT
AGCCCCCCGGGACACATCAAGTTCAGGGCACTCACACACCCAGCGTAGCT
GCATTTCCCGGAGCCTCTGATGGGCAAAATCGACATTGCGATGTTGTAAC
CGTCGACCAGGCTCACGTCGTAAAAATCCTGCTGCTGCCCCAGCGTGATT
TCGGCGAGGGTGGCCGGCGGGCTGCCCCCTATGCCGTTGCAAAAAAACGA
TCCGCCGCAGTCCCCGGTGGCGCAGCGGCCCCGGCCTGAGGCGTCGAACC
TGCATCCATGGCGACCCCAAAAGCGCCCGGACCAAAGGGGCGGTAGGCGT
ATGGTGTAGGCCTTGTTT
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