CF836616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: UDG_RICPR (UDP-glucose 6-dehydrogenase OS=Rickettsia prowazekii GN=udg PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22 Identity = 75/232 (32.33%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 52 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAKLSKLAANAFLAQRISSVN 741 + I IG+GYVG ++ I + V +D +I+ N LPIYE LD +K L F+ D +F++V TP+K G ADL Y A ++ D ++V KSTVP + I L +KG F + SNPEFL EG+A++D PDR+++G +++ L+ +YA + + + L TNL +++L K +N+FLA +I+ +N Sbjct: 1 MNITFIGSGYVG--LVSGIIMGYLGHNVTCLDNDDVKISKLNKKILPIYEAKLDEYLKHALESDRLKFTNIYSNEFRNFDAIFITVGTPSKELG-----EADLKYVYDAVDKVSKHINKDCLIVIKSTVPPGSCNNIIAYL--KAKGFSFNVASNPEFLREGSAVEDFLYPDRIVVG----VNNKESEALLRKIYAPLIEQGAKFLVTNLVTSELIKYVSNSFLATKIAFIN 219
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: UDG_RICBR (UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (strain RML369-C) GN=udg PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.174e-21 Identity = 74/233 (31.76%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTY-WESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAKLSKLAANAFLAQRISSVN 741 + I IG+GYVG ++ + + V +D ++I+ N LPIYE LD Q + L F++ + + + VF++V TP+K G ADL+Y +E+ ++ ++K D ++V KSTVP + I L KG F + SNPEFL EG A++D PDR++IG +++ L+ +Y ++ T+L +A+L K +N+FLA +I+ +N Sbjct: 1 MNITFIGSGYVG--LVSGVMMSYLGHNVTCLDNDEAKISKLNKRILPIYETKLDKYFTQALEHERLKFTSFYNEELKNTEAVFITVGTPSKASG-----EADLSYVYEAIDKISLHINK-DCLIVIKSTVPPNSCNNIINYL--KEKGFSFNVASNPEFLREGNAVEDFLYPDRIVIG----VNNKESEDILRKIYMPLTDNGAELVITDLVTAELIKYGSNSFLATKIAFIN 219
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: WECC_METM7 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=wecC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18 Identity = 75/230 (32.61%), Postives = 115/230 (50.00%), Query Frame = 1 Query: 55 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 KIC IG GY+G PT +++A EV VD++ R+N + +L I EPGL +VK KNL T E EAD + V TP G+ K DLTY SA + I K ++V +ST+P +T + I + + K + PE + G +++L DR+ IGG +K+ + K++Y +V E +I T+ +A++ KL N + I+ N Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYEVVGVDVNEKRVNHIKNGELKIEEPGLLTLVKGAINSKNLNVQTSAE----EADAFIICVPTPALENEDGS-KKCDLTYVMSAVQAIIPFLKDGNLIVVESTIPPETTKKIYETINK-----KIYVAHCPERVLPGKILKELVENDRI-IGG----INKKSAEMAKEIYKSFV-EGKIYITDSNTAEMVKLMENTYRDINIALAN 222
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: WECC_METMP (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis GN=wecC PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18 Identity = 74/230 (32.17%), Postives = 117/230 (50.87%), Query Frame = 1 Query: 55 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 KIC IG GY+G PT +++A +V VD++ R+N + +L I EPGL +VK KNL +V +EAD + V TP + G+ K DL+Y SA I K ++V +ST+P +T + I + L K + PE + G +++L DR+ IGG +K+ + K++Y +V E +I TT+ +A++ KL N + I+ N Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYDVVGVDVNEKRVNQIKNGELKIEEPGLLTLVKGAINSKNL----NVRTSATEADAFIICVPTPALAKEDGS-KKCDLSYVMSAVEAILPFVKDGNLIVIESTIPPETTKKIYETLNK-----KIYVAHCPERVLPGKILKELVENDRI-IGG----INKKSAEMAKEIYKSFV-EGQIYTTDSNTAEMVKLMENTYRDINIALAN 222
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: WECC_METM5 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=wecC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 72/230 (31.30%), Postives = 115/230 (50.00%), Query Frame = 1 Query: 55 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 KIC IG GY+G PT +++A EV VD++ R+N + +L I EPGL +VK KNL +V+ +EAD + V TP G+ K DLTY A + I K ++V +ST+P + + I + + K + PE + G +++L DR+ IGG +K+ + K++Y +V E +I T+ +A++ KL N + I+ N Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYEVVGVDVNEKRVNQIKNGELKIEEPGLLTLVKGAINSKNL----NVQTSATEADAFIICVPTPALENEDGS-KKCDLTYVMGAVQNIIPFLKEGNLIVIESTIPPEITKKIYETIDK-----KIYVAHCPERVLPGKILKELVENDRI-IGG----INKKSAEMAKEIYKSFV-EGKIYITDSNTAEMVKLMENTYRDINIALAN 222
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: ALGD_PSEAE (GDP-mannose 6-dehydrogenase OS=Pseudomonas aeruginosa GN=algD PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 68/238 (28.57%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 52 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKN-LFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 ++I G GYVG ++ + EV VD+S ++I+ N + PI EPGL+ +++Q R L +TD +K V ++D+ F+ V TP+K G DL Y E+ R I + S+ +VV + +P + ++ S G+ F + +NPEFL E TAI+D P +IG + G L+++Y + I+ + A++ K N + A +++ N Sbjct: 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGD----LLEEIYREL--DAPIIRKTVEVAEMIKYTCNVWHAAKVTFAN 225
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: WECC_METVS (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=wecC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 74/234 (31.62%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 43 RKMVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 +K+ KIC IG GY+G PT +++A EV VDIS R+N + I EPGL ++K KNL T EK AD + V TP G+ K DL+Y A I ++V +ST+P +T + I I+ K + PE + G +++L DR+ IGG +K+ + K++Y +V E +I T+ +A++ KL N + I+ N Sbjct: 7 QKIKKICVIGLGYIGLPTASMLANH--GYEVIGVDISEKRVNEIKNGDFKIEEPGLLTLLKGAINSKNLNVKTKAEK----ADAFIICVPTPAIGCDDGS-KKCDLSYVLDAVNSILPYIDEGNLIVIESTIPPETTQKIYDIIDK-----KVYVAHCPERVLPGKILKELVENDRI-IGG----INKKSAEMAKEIYKSFV-EGKIYITDSNTAEMVKLMENTYRDINIALAN 222
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: EPSD1_RALSO (NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase OS=Ralstonia solanacearum GN=epsD PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.800e-15 Identity = 69/238 (28.99%), Postives = 112/238 (47.06%), Query Frame = 1 Query: 58 ICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF----------QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 I +G GY+G PT V+A + EV VDI+ ++ N ++ I EP LD +V+ + +T + AD ++V TP K DL+Y E+AAR IA V K +VV +ST PV E + L+ + F ++ PE + G +++L DR++ G TP+ +A + L +++ R + T+ +A++ KL NAF I+ N Sbjct: 12 ISVVGLGYIGLPTATVLASR--QREVIGVDINQHAVDTINQGRIHIVEPDLDMLVRAAVSQGYLRATTEPE---PADAFLIAVPTPFLDN-----KQPDLSYIEAAARAIAPVLKRGDLVVLESTSPVGATEQLSDWLSAQRPDLSFPHQQGEESDIRVAHCPERVLPGHVLRELVENDRII--GGMTPKCSEAAQRLYELFV----RGRCIVTDARTAEMCKLTENAFRDVNIAFAN 233
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: ALGD_PSEPK (GDP-mannose 6-dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=algD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15 Identity = 69/239 (28.87%), Postives = 112/239 (46.86%), Query Frame = 1 Query: 52 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQG-LGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 ++I G GYVG + + EV VD+S ++I+ N + PI EPGL+ +++Q L +TD + + +D+ + V TP+K G LG L Y ES R V+ D ++ IVV + +P + IL S G+ F + NPEFL E TAI+D P +IG ++ G L+ +Y + I+ + A++ K N + A +++ N Sbjct: 1 MRISIFGLGYVGAVCAGCLTAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGIANGRLRGTTDFAEAIRASDVSMICVGTPSKKNGDLG------LEYIESVCREIGYVLRDTTRRHTIVVRSTVLPGTVKNVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDQPPMTVIGELDSASGD----ILQALYEEL--DAPIIRKPIEVAEMIKYTCNVWHATKVTFAN 225
BLAST of CF836616 vs. ExPASy Swiss-Prot
Match: WECC_META3 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=wecC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 69/234 (29.49%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 43 RKMVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAKLSKLAANAFLAQRISSVN 741 +++ KIC +G GY+G PT +++A++ +V VDI R+ +L I E GL ++ NL T+ E EAD+ + V TP GK DL SA I K +++ +ST+P KT E I ++ N+ G + PE + G +++L DR IGG +K+ + K++YA ++ E + T+ +A++ KL N F I+ N Sbjct: 9 KEINKICVVGLGYIGLPTASMLAIQ--GYKVIGVDIDEERVKTIRDGKLIINEQGLMTLLTGAITSGNLVVKTEPE----EADVYIICVPTPATAD--KNGKKCDLICVLSAVNNIKPYLKDGDLIIIESTIPPKTTEKIYDDISKNT-GKNIYMAYCPERVLPGNILKELVENDRT-IGG----INKKSAQLAKEIYASFI-EGNLYITDSTTAEMVKLMENTFRDVNIALAN 227 The following BLAST results are available for this feature:
BLAST of CF836616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836616 ID=CF836616; Name=CF836616; organism=Citrus sinensis; type=EST; length=743bpback to top |