CF836621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46 Identity = 84/166 (50.60%), Postives = 123/166 (74.10%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL P+++ F I D + P + + FIS +YDATTHFE+T D+ ++Y +TG Sbjct: 261 QNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46 Identity = 84/166 (50.60%), Postives = 123/166 (74.10%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL P+++ F I D + P + + FIS +YDATTHFE+T D+ ++Y +TG Sbjct: 261 QNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46 Identity = 84/166 (50.60%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL P+++ F I D P + + FIS +YDATTHFE+T D+ N+Y +TG Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESLIFISRTYDATTHFETTCDDIKNIYKRMTG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 5.610e-44 Identity = 81/166 (48.80%), Postives = 119/166 (71.69%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDATTHFE+T D+ ++Y + G Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKDIYKRMMG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.327e-44 Identity = 81/166 (48.80%), Postives = 120/166 (72.29%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NT+D++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDATTHFE+T D+ ++Y +TG Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELLKPIEQKFVSISDLLVPKDLGTDSQIFISRTYDATTHFETTCGDIKDIYKRMTG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.528e-41 Identity = 80/166 (48.19%), Postives = 115/166 (69.28%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 ++G +GV S + AK K+++ DPSY KVR VGR+ RAI I++HPIPNT++ SVQ+I+PQ Q+ R+ D+Y+ S HNV PKG ++A +ST ET +P +E+ PG+ LLGPV E F + + YEPV + + D C+IS S DAT+HFE+ DV ++Y +TG Sbjct: 261 DDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRAICILNHPIPNTDNLDSVQIIIPQNQVKRKHDIYIAGISSVHNVCPKGYYLAIISTIVETANPLSEIAPGLKLLGPVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFETLTCDVRDIYKRMTG 426
BLAST of CF836621 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.439e-39 Identity = 78/167 (46.71%), Postives = 113/167 (67.66%), Query Frame = -2 Query: 308 EEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITG 805 + GK GV ++ T K V+ DP+Y P K + G RV RAI I++HP+PNT+++ S+Q+I+PQ QLGR+SD+Y+ S +HNV KG ++A +ST ETD P EL+P LLGP++E F I + +EP + S DN ++S SYDA++HFES DV ++Y +TG Sbjct: 271 DTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESMTDDVKDIYFRVTG 437 The following BLAST results are available for this feature:
BLAST of CF836621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836621 ID=CF836621; Name=CF836621; organism=Citrus sinensis; type=EST; length=806bpback to top |