CF836632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter sulfurreducens GN=ispF PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.183e-39 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = -2 Query: 185 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 652 R+GHG+D+HRL G LI+GG+++PHE G HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L G+ +GNLDAT++ QRPK++P+ +R +++ L ADP VN+KA T E++ G IAA+ V+L+ +K Sbjct: 2 RIGHGYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISDAILGALALGDIGKHFPDTDPRYKGADSRALLRHVMELATRKGFHLGNLDATIVAQRPKMAPHIPLMREHIAADLMADPDRVNVKATTTEELGFAGRGEGIAAYAVVLMEEK 157
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.183e-39 Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = -2 Query: 185 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 655 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+KA T EK+ G IA+ V+LL KK Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus sp. (strain WCH70) GN=ispF PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.018e-39 Identity = 77/157 (49.04%), Postives = 109/157 (69.43%), Query Frame = -2 Query: 185 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 655 FR+G GFD+H+L G PLIIGG+ +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+D +K A S++ +K+ L+ + GYE+ NLD T+I Q+PK++P+ E ++ N++ LL + + VN+KA T EK+ G IAA V+LL KK Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGVRIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGKHFPDTDECYKDADSALLLKQVWELVKQQGYELANLDCTIIAQKPKMAPHIEQMKENIANLLEGELSQVNVKATTTEKLGFTGREEGIAAQAVVLLQKK 158
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.442e-39 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = -2 Query: 185 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 661 +PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+ +D AG+++ N+DAT+ Q PK+ P+ + N++ LG +VN+KAKT+E + LG IAA V LL ++ Sbjct: 3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQAPKIGPHAPAMVANIAADLGIAHDLVNIKAKTNEGLGYLGRKEGIAATVVTLLARQ 161
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_BACCN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispF PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.442e-39 Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = -2 Query: 185 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 655 FR+G GFD+H G PLIIGGI +P+E+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+KA T EK+ G IA+ V+LL KK Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLLQKK 158
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.667e-39 Identity = 73/153 (47.71%), Postives = 105/153 (68.63%), Query Frame = -2 Query: 194 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 652 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q PK++P+ E +R NL++ LG VN+KA T E++ G IAAH V L+ Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLGVALECVNVKATTTERLGFAGREEGIAAHAVALI 157
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38 Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = -2 Query: 188 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 661 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + +AGY +GN+DAT+I Q+PKL+P+ + NL+E LG P N+KAKT+EK+ G+ I A V+L+ + Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAEDLGIAPERCNVKAKTNEKLGFEGKEEGIVAQAVVLIYR 161
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_PELCD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispF PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38 Identity = 76/155 (49.03%), Postives = 106/155 (68.39%), Query Frame = -2 Query: 188 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 652 R+GHG+D+H+L LI+GG+++PH G HSD DVLLH + DAILGALG DIG+ FPD+DP +KG S + E +RL + GY +GNLDAT+I QRPKL+P+ +R N++E G D + +N+KA T E++ G I++H V+LL K Sbjct: 3 RIGHGYDVHQLVAERKLILGGVDIPHTLGLLGHSDADVLLHAICDAILGALGEGDIGKHFPDTDPAYKGISSIKLLHEVMRLAETKGYRLGNLDATIIAQRPKLAPFIGNMRENIAEACGTDVSRINVKATTTEQLGFEGRGEGISSHAVVLLNK 157
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_LARHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=ispF PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38 Identity = 75/156 (48.08%), Postives = 109/156 (69.87%), Query Frame = -2 Query: 185 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 652 R+G G+D+HRL G PL++GG+ +P ++G + HSD D L H + DA+ GA L DIG+ FPD+D ++KGA S V ++EAVR + EAG++I N+D+T+I Q P+L+PY E +R++L+ LG P VN+KAKT E++ LG IAA V LL + Sbjct: 4 RIGQGWDVHRLVEGRPLVLGGVTIPFDKGLDGHSDADALCHAITDALFGAAALGDIGRHFPDTDLEFKGADSRVLLREAVRRVREAGFDIVNVDSTVIAQAPRLAPYVEAMRSHLAADLGLSPDRVNVKAKTSERLGHLGRGEGIAADAVCLLQSR 159
BLAST of CF836632 vs. ExPASy Swiss-Prot
Match: ISPF_GEOUR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter uraniireducens (strain Rf4) GN=ispF PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.708e-38 Identity = 77/156 (49.36%), Postives = 107/156 (68.59%), Query Frame = -2 Query: 185 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 652 R+GHG+D+H+L LI+GG+++P+ERG HSD DVLLH + DAILGA+G DIG+ FPD+DP +KGA S + + L GY IGNLDAT++ QRPKL+P+ +R N++ L AD +N+KA T E++ G IAA+TV+LL +K Sbjct: 2 RIGHGYDVHKLVENRKLILGGVDIPYERGLLGHSDADVLLHAISDAILGAIGEGDIGKHFPDTDPAYKGADSIKLLMHVMALAVGKGYAIGNLDATIVAQRPKLAPHIPQMRENIARALKADADRINVKATTTEELGFAGRGEGIAAYTVVLLERK 157 The following BLAST results are available for this feature:
BLAST of CF836632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836632 ID=CF836632; Name=CF836632; organism=Citrus sinensis; type=EST; length=848bpback to top |