CF838099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18 Identity = 60/166 (36.14%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 250 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSF 735 + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++I+ +SSD+GLCG I+S+ K K+ + KE V +GEK K+IL R + ++ + P + SV+A ++L + EFD II+++F SV+S+ Sbjct: 6 ITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISY 171
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.410e-18 Identity = 64/203 (31.53%), Postives = 111/203 (54.68%), Query Frame = 1 Query: 250 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKL 804 ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A+L GD+ T + +++V +++++GLCGG NS+ K++++ + K K + +G+K + L RD K + + ++Y + +A D+L EFD I +++F SV+S +PT ++ P E +A++ L Sbjct: 7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVISQIPTAQQII-PASFEGDADADATL 208
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18 Identity = 63/205 (30.73%), Postives = 102/205 (49.76%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGG 798 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + ++L + + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R + I P++Y + +ADDIL EFD + YS+F SV+S +PT ++ EL + + + G Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKG 207
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18 Identity = 61/196 (31.12%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPEL 771 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG +TP + A + +++V ++++GLCG NS+ ++++ + K K + +G+K IL R+ + I +I L + + +++L EFD + YS+F SV++ +PT ++ E+ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPTAQQIIPAEI 198
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.357e-18 Identity = 64/205 (31.22%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAES 792 S + +RNR+ SVK+ QKIT AMKMVAASKLR Q +AE R +L T T + +++V ++SD+GLCGG NST V+ ++ K +G + K + +G K + +L R+ I ++ + L++ + +L+ EFD +IY+KF S ++ + T V+ +P + AE+ Sbjct: 3 SLKDIRNRIGSVKSTQKITSAMKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVIPFAPAVATEPAET 207
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_METS4 (ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46) GN=atpG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.996e-18 Identity = 59/196 (30.10%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TPTVDAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPEL 771 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG+ TP + + ++++ ++++GLCG NS+ ++++ + + + K + +G+K IL R+ + I +I L + +A ++L EFD + YS+F SV+ +PT ++ E+ Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLSGTGADRVHLLLVCTAERGLCGAFNSSIARLARDHARRLTAEGRTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRFRSVIVQIPTAQQIIPAEI 198
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_SILST (ATP synthase gamma chain OS=Silicibacter sp. (strain TM1040) GN=atpG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL---------GDTP------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI---ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAES 792 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE++R + F A++ DT T + ++V +++++GLCGG N+ K+++ K K + +G+K + +L R+ D+ + +TE+++ + Y +A DIL EFD I YSKF +VV+ +PT ++ E AE+ Sbjct: 3 SLKDLKNRISSVKNTRKITKAMQMVAAAKLRRAQEAAEDARPYAERFNAVMAGLAASVGQSDTAPKLLAGTGSDQVQLLVVMTAERGLCGGFNANIAKLARQKVLDLQAAGKTVKILTVGKKGRDVLKREF-GDLFVGHVDLTEVKR--VGYVDAQGIAKDILARFDAGEFDVATIFYSKFQNVVTQIPTAQQIIPAEFDAEGAEA 205
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_PARDP (ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd 1222) GN=atpG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17 Identity = 61/201 (30.35%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREA 786 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R A++ T + +++++V ++S++GL GG NS+ VK+++ + K+ + +G+K + L R+ + + + Y +AD+IL N EFD + Y++F SV+S +PT V+ + E EA Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPYADRMAAVMAGLTAAAAGSDMAPRLLAGTGEDRRHLLVVMTSERGLAGGFNSSIVKLARLRLQELQAQGKQVSILTVGKKGREQLKREYGDLFVNHVDLSEVKRIGYDNARAIADEILDRFDNGEFDVATLFYNRFESVISQVPTARQVIPAVIEEGEA 203
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_SILPO (ATP synthase gamma chain OS=Silicibacter pomeroyi GN=atpG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 250 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP---------------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAES 792 ++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + F A++ T + +++V +++++GLCGG NS K+++ K K + +G+K + + RD ++ + L Y +A D+L EFD I Y+KF +VV+ LPT ++ P E E ES Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQESAEAARPYAERFNAVMAGLAASVGGSDSAPLLLRGTGSDQVHLLVVMTAERGLCGGFNSNIAKLARVRANELLAKGKTVKILTVGKKGRDAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQLPTAQQII-PAAFEAEGES 204
BLAST of CF838099 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS5 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 63/202 (31.19%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 238 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAE 789 S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ T K ++V +++++GLCGG NS+ V+++++ K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ P + E E E Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGSSESAPRLLAGTGSDKVQLLVVMTAERGLCGGFNSSIVRLARAHAAKLLAEGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDVLDRFDKGEFDVATIFFARFQSVISQIPTAQQVI-PAVFEGEGE 203 The following BLAST results are available for this feature:
BLAST of CF838099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838099 ID=CF838099; Name=CF838099; organism=Citrus sinensis; type=EST; length=811bpback to top |