CF838121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.895e-35 Identity = 91/242 (37.60%), Postives = 129/242 (53.31%), Query Frame = 2 Query: 170 ESYDESFDGRWIVSQKDEYKGVWKHSKSEGHE----DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 E D S++ RW+ S+ + G +K S + + D G+ + AK Y+ + D+ S K T+V+QY V+ + G++CGG Y+K +R +F E+PY +MFGPD CG T +VH IL +K GE +K + SD+LTH+YT IL DN + IDGE Q + +D+ L+P K I WDER I D + VKPEDW++ P I D DA KPE W Sbjct: 22 EFNDASWEKRWVQSKHKDDFGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKEFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRGDAD---LADFHGETPYNVMFGPDICGPTRRVHVILNYK----GE--NKLIKKEITCKSDELTHLYTLILNADNTYEVKIDGESAQTGSL--EEDWD--LLPAKKIKDPDAKKPEDWDEREYIDDAEDVKPEDWEK--PEHIPDPDAKKPEDW 248
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35 Identity = 97/258 (37.60%), Postives = 138/258 (53.49%), Query Frame = 2 Query: 134 LISASDDATILYESYDESFDGRWIVSQ--KDE-YKGVWKHSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 L++ + E +++ +D RW+ S+ KDE G W ++ + + D G+ E + YAI E E S KD T+V Q+ V+ + L+CGG Y+K L +G V K+F ++PY IMFGPD CG +T KVH IL + N + +K +D+LTHVYT I++PD ILID EKQ + + D L+P K I W+++ IPDP+ KPE +D D P EI D DA KPE W Sbjct: 18 LLAIASAKVFFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYIKLL----SGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNNTNN------LIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWD----LLPAKKIKDPEAKKPEDWEDQEYIPDPEDKKPEGYD-DIPKEITDPDAKKPEDW 259
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.233e-35 Identity = 93/245 (37.96%), Postives = 131/245 (53.47%), Query Frame = 2 Query: 170 ESYDESFDGRWIVSQ--KDE-YKGVWKHSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 E +++ ++ RW+ S+ KDE G W ++ + + D G+ E + YAI E E S KD T+V Q+ V+ + L+CGG Y+K L + K+F ++PY IMFGPD CG +T KVH I + + H +K +D+LTHVYT IL+PD ILID +EKQ + D L+P K I WD++ IPDP+ KPE +D D P EI D +A KPE W Sbjct: 31 ERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPE-FSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAIFNYNDTN------HLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWD----LLPAKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYD-DIPAEITDPEAKKPEDW 260
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.233e-35 Identity = 94/248 (37.90%), Postives = 127/248 (51.21%), Query Frame = 2 Query: 161 ILYESYDESFDGRWIVS---QKDEYKGVWKHSK---SEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 I E +++ ++ RW+ S + D G WKH+ S D G+ E + YAI E E S KD T+V Q+ V+ + L+CGG Y+K L +F ++PY IMFGPD CG +T KVH IL + H +K +D+LTHVYT +L+PD ILID EKQ + + D L+P K I WD++ IPDP+ KP +D D P EI D DA KPE W Sbjct: 25 IFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVD---QTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN------HLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWD----LLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYD-DIPKEIPDTDAKKPEDW 257
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_CAEEL (Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.223e-35 Identity = 91/242 (37.60%), Postives = 129/242 (53.31%), Query Frame = 2 Query: 170 ESYDESFDGRWIVSQKDEYKGVWKHSKSEGHE----DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 E D S++ RW+ S+ + G +K S + + D G+ + AK Y+ + D+ S K T+V+QY V+ + G++CGG Y+K +R A +F E+PY +MFGPD CG T +VH IL +K GE +K + SD+LTH+YT IL DN + IDGE Q + +D+ L+P K I WDER I D + KPEDW++ P I D DA KPE W Sbjct: 22 EFNDASWEKRWVQSKHKDDFGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMR---ADADLGDFHGETPYNVMFGPDICGPTRRVHVILNYK----GE--NKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSL--EEDWD--LLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEK--PEHIPDPDAKKPEDW 248
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.162e-33 Identity = 85/241 (35.27%), Postives = 123/241 (51.04%), Query Frame = 2 Query: 179 DESFDGRWIVSQKD-----EYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 D+S++ W+ S+ ++K S+ +D GL E A+ YA+ ++ +P S + +V+Q+ V+ + ++CGG YLK + K+ E+PY IMFGPD CG T KVH I +K H +K D TH+YT I+KPDN +LID E+ + + A DF +P K I WD++ IPDP+ KPEDWD+ P I D DA KPE W Sbjct: 29 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDF----LPNKKIKDPEAKKPEDWDDKPTIPDPEDKKPEDWDK--PEHIPDPDATKPEDW 253
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_ONCVO (Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.150e-32 Identity = 91/241 (37.76%), Postives = 124/241 (51.45%), Query Frame = 2 Query: 179 DESFDGRWIVSQKDEYKGVWK--HSKSEGH--EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDN-ESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 D+ ++ RWI S+ + G W+ H K G +D GL + AK Y+I + D+ S K ++V+Q+ V+ + ++CGG Y+K + A V+ E + E+PY IMFGPD CG T KVH I +K+ H +K D TH+YT I+ DN + IDGE+ + A DF PP K I WDER I D D KPEDWD+ P I D DA KPE W Sbjct: 27 DDDWEKRWIKSKHKDDFGKWEISHGKFYGDAVKDKGLKTTQDAKFYSIGAKFDKSFSNKGKSLVIQFSVKHEQDIDCGGGYVKLM----ASDVNLEDSHGETPYHIMFGPDICGPGTKKVHVIFHYKDRN------HMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGEKAESGELEADWDFLPP----KKIKDPDAKKPEDWDEREFIDDEDDKKPEDWDK--PEHIPDPDAKKPEDW 251
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32 Identity = 90/246 (36.59%), Postives = 132/246 (53.66%), Query Frame = 2 Query: 170 ESYDESFDGRWIVS---QKDEYKGVWKHSKSEGHEDY---GLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHL--KNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 +++D ++ RW+VS ++D G H+ + D G+ E A+ YA+ + S K +VLQY V+ + ++CGG+Y+K L P + FD ES Y IMFGPD CGA+ +VH IL +K ++HL K V +D+LTH YT ++ PDN ++L+D +E Q N ADD++ L+P K I W + +I DP+ VKP D D P I D +AVKPE W Sbjct: 25 DTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPS-FSNKGKDLVLQYTVKNEQKVDCGGSYIKLL-PSKLD--QSAFDGESEYSIMFGPDVCGASKRVHVILNYKG-------KNHLIKKEINKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNL--ADDWE--LLPSKQIKDPKQSKPVDWVDVKEIDDPEDVKPAGHD-DIPASIVDPEAVKPEDW 254
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32 Identity = 91/258 (35.27%), Postives = 127/258 (49.22%), Query Frame = 2 Query: 134 LISASDDATILYESYDESFDGRWIVSQ---KDEYKGVWKHSKS----EGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 L+ A+ E++D S+ RW S D G +K + + D G+ G +K +AI L V+Q+ V+ + L+CGG Y+K + P + EF ++PY IMFGPD CG +T KVH IL +K + +K +D+LTHVYT ++KPDN ++LID +E + D PP KTI WDER +I DP+ KPE WD D P I D+DA KPE W Sbjct: 12 LVVAASAKDYFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVV-PATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKN------YLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPP----KTIKDPKASKPEDWDEREEIADPEDKKPEGWD-DIPATIADKDAKKPEDW 257
BLAST of CF838121 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.735e-32 Identity = 93/246 (37.80%), Postives = 129/246 (52.44%), Query Frame = 2 Query: 170 ESYDESFDGRWIVS--QKDE-YKGVWKHSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIXXXXXXXXXXWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGW 883 E +++ ++ +W+ S ++DE G W + + + D G+ E + YAI E S K T+V Q+ V+ + L+CGG Y+K L +G V K+F ++PY IMFGPD CG +T KVH IL GE H +K +D+LTHVYT IL+PD ILID EKQ + D PP K I W+++ IPDP+ KPE +D D P EI D +A KPE W Sbjct: 28 ERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPE-FSNKGKTLVFQFSVKHEQKLDCGGGYMKLL----SGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT-----KGE-TNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPP----KQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYD-DIPKEITDPEAKKPEDW 257 The following BLAST results are available for this feature:
BLAST of CF838121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838121 ID=CF838121; Name=CF838121; organism=Citrus sinensis; type=EST; length=884bpback to top |