CF838169

Overview
NameCF838169
Unique NameCF838169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.756e-46
Identity = 96/252 (38.10%), Postives = 139/252 (55.16%), Query Frame = 2
Query:   29 ERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANHPL 784
            E+  +G AA+D SG LSP+  + R+TG +DV IK+L+CGICH+D+H IKN+   S YP+                 + F              CR+C  C    E +C + +++YN V  DG  T GG++  +VV ++FVV  P+ M L+  APLLCAG+TV++P+ + GL                      A+A G  VTVISSS  K+ EA+E LGAD ++VSS A  M+ A  ++D +I+T  AN P+
Sbjct:   13 EQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPM 264          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.259e-45
Identity = 99/253 (39.13%), Postives = 135/253 (53.36%), Query Frame = 2
Query:   44 GWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG------MALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANHPL 784
            GWAA+D +G+LSP++Y LR  G EDV +K+L+CGICH+D+  IKN+ G + YP+                 + F              CR C  C    E YC   + S+N    DG    GGF+E  VV+Q++VV+IP G        L++ APLLCAGVTV+ P+   GL +                     KA G  VTVIS+S  K  EA+E LGAD +L+S++A +M+ AA ++D IIDT  A H L
Sbjct:   10 GWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDL 262          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.919e-43
Identity = 96/253 (37.94%), Postives = 138/253 (54.55%), Query Frame = 2
Query:   32 RATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ-AAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS-DKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANHPL 784
            R   GWAA+D SG+LSP+ ++ R+ G EDV ++VLYCGICHTD+H  KND G S YP                    +              CR+C+ C  ++E YC K I +  D + DG  T GG+++SMVVD+ FV +IP+G+ L+   +  LC G +  SPL ++GL +                    AK  G  +TVIS+S   K+ EA+++LGAD +LVS D  +M+   ++LD IIDT  A+H +
Sbjct:   12 RKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSI 263          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.904e-41
Identity = 84/244 (34.43%), Postives = 128/244 (52.46%), Query Frame = 2
Query:   47 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANH 778
            WAA+DPSGILSPY +  R   +EDV +++ +CG+C+ D+   +N    S YP+                   F              C++C  C + +E +C+K + +YN V +DG  T+GG++  ++V Q++  KIP    L +AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S+ KR EA+  LGAD +++SSD  +M+    SL +IIDT   +H
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDH 256          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.125e-40
Identity = 94/257 (36.58%), Postives = 135/257 (52.53%), Query Frame = 2
Query:   32 RATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCN-KKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPD--------GMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPAN 775
            R  +G AA D SG L+P   + R TG +DV IKVLYCGICH+D+H IKN+   + YP+                 + F              C  C  C    E YC+   +++YN V  DG  T GG+++++VV Q+FVV+ P          + L+  APLLCAGVTV++P+   GL ++                   A+A G  VTVIS+S  KR EA+E LGAD ++VS++A+ M+ A  ++  II+T  A+
Sbjct:   21 RKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASAS 277          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.365e-39
Identity = 84/254 (33.07%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   17 SLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANH 778
            S   E   M WAA+DPSG+LSP+T T R+   +DV + + +CG+C+ D+   +N  G S YP+                   F              CR C  C    E  C K ++++N +  DG  T+GG++  +VV +++  KIP    LE AAPLLCAG+TV++P+    + Q                     KA G  VTV S+S  K+ EA+  LGA+ +++SSD  +M+    SLD+++DT   +H
Sbjct:    4 SESVENECMCWAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDH 257          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.022e-34
Identity = 82/244 (33.61%), Postives = 123/244 (50.41%), Query Frame = 2
Query:   47 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPAN 775
            +AA   +  L+  T T R+ G  DV I + + GICH+DIH +K + G  NYP+                 + +              CR C  C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S KK  + +  LGA  Y  ++D    ++     D I++T  AN
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSAN 248          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.022e-34
Identity = 82/244 (33.61%), Postives = 123/244 (50.41%), Query Frame = 2
Query:   47 WAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPAN 775
            +AA   +  L+  T T R+ G  DV I + + GICH+DIH +K + G  NYP+                 + +              CR C  C   +EQYC     ++YN +  DG+PTQGG++E++VVD+ +V++IPD + L+ AAPLLCAG+T++SPL H+    +                   A AMG  VTV+S S KK  + +  LGA  Y  ++D    ++     D I++T  AN
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTRVAIIGLGGLGHMGVKLGA-AMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSAN 248          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.198e-27
Identity = 76/231 (32.90%), Postives = 107/231 (46.32%), Query Frame = 2
Query:   86 TYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPAN 775
            T   R     DV I + + GICH+DIH   ++ G   +PM                 +                C  C  C    EQ+C K +  +YN V  DG PT GG+++ +VV  +FVV+IPD + ++ A+PLLCAG+T +SPL H+ +                      A AMG  VTV+S S  K+ EA+E LGA+ Y  +SD       A   D I++T  AN
Sbjct:   23 TIERRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVGPG-KKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSAN 251          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.486e-27
Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 2
Query:   32 RATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGK-PTQGGFAESMVVDQKFVVKIPDGM-ALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGPANHPL 784
            +A   ++AK P   L P   T R  G  DV I++ YCG+CH+D+HQ++++   + YP                    +              C++C  CE  +E YC+    +YN    D    T GG+++ +VV +++V++I      L   APLLCAG+T +SPL H+                        A AMG HV   ++S+ KR EA + LGAD+ + S +A  M     S D+I++T  A H L
Sbjct:    4 KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPG-KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL 251          
The following BLAST results are available for this feature:
BLAST of CF838169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CADH3_ORYSJ9.756e-4638.10Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH9_ORYSJ8.259e-4539.13Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
MTDH3_STYHU5.919e-4337.94Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH4_ORYSJ1.904e-4134.43Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH7_ORYSJ6.125e-4036.58Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH1_ARATH1.365e-3933.07Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU5.022e-3433.61NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO5.022e-3433.61NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU1.198e-2732.90Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI3.486e-2730.43Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05N21_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838169 ID=CF838169; Name=CF838169; organism=Citrus sinensis; type=EST; length=786bp
GTCACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAACGATGGGGTGGG
CTGCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGA
AACACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTG
CCACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATC
CGATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCA
GAAGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGT
TGGTTGTTGCAGAAACTGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACT
GCAATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCT
ACACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGT
GAAAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTG
CTGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGC
GGGCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGT
TTTGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCTG
ATAAGAAAAGAGTGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTT
GTCAGCTCCGACGCAACTCGTATGCAAGAAGCCGCTGACTCACTTGATTA
TATCATTGATACCGGGCCCGCAAATCACCCTCTGGA
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