CF838169

Overview
NameCF838169
Unique NameCF838169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12
Identity = 57/228 (25.00%), Postives = 84/228 (36.84%), Query Frame = 2
Query:   89 YTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSN-YPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTGP 769
            Y +      ++ I V Y G+CHTD+H  K D  ++   P+                   +              C +C  C+   E  C +   S       G    G F +    D     KIP G  L   AP+LCAGVTV+  L    L                      A+AMG  V  I   D+K  E ++ LGA+ Y+   D T+ ++  +++    D GP
Sbjct:   26 YPVPTPKPNELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADLS-------GYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAIDGGDEKG-EFVKSLGAEAYV---DFTKDKDIVEAVKKATDGGP 242          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12
Identity = 55/224 (24.55%), Postives = 81/224 (36.16%), Query Frame = 2
Query:   38 TMGWA--AKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYL 700
            TM WA  A+   G L      +   G + + +K+ Y G+CHTD+H +     +    P+                   F              C  C  C    +  C +   S       G    G F +  +       KIP G+ L+ AAP+LCAG+TV+  L   G++                     AKAMG  V  +   D+KR    E LG + Y+
Sbjct:    5 TMQWAQVAEKVGGPLVYKQIPVPKPGPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLS-------GYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRA-MCESLGTETYV 220          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11
Identity = 53/198 (26.77%), Postives = 70/198 (35.35%), Query Frame = 2
Query:  110 AEDVYIKVLYCGICHTDIHQIKNDLGMS-NYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYL 700
            A ++ I V Y G+CHTD+H  K D  +    P+                  NF              C +C  CE   E  C +   S       G    G F +    D     +IP G  L + AP+LCAGVTV+  L    LK                     AKAMG  V  I   D K  E  +  G + ++
Sbjct:   58 ANEILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLS-------GYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADLKPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKE-ELFKQCGGEVFI 247          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11
Identity = 54/205 (26.34%), Postives = 74/205 (36.10%), Query Frame = 2
Query:  110 AEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGAD---QYLVSSD 712
            A ++ I V Y G+CHTD+H  K D  + +  P+                   +              C +C  CE   E  C        D    G    G F +    D     +IP G  L + AP+LCAGVTV+  L    LK                     AKAMG+ V  I +  +K  +  + LG +    Y VS D
Sbjct:   31 ANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCP-------DADLSGYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSADLKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDTGAEK-AKLFKELGGEYFVDYAVSKD 227          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.682e-11
Identity = 51/198 (25.76%), Postives = 74/198 (37.37%), Query Frame = 2
Query:  110 AEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYL 700
            A ++ I V Y G+CHTD+H  K D  + +  P+                   +              C +C  CE   E  C +   S       G    G F +    D     KIP G  L + AP+LCAGVTV+  L    LK                     AKAMG+ V  I + ++K  +  + LG + ++
Sbjct:   33 ANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAGEEK-AKLFKDLGGEYFI 222          
BLAST of CF838169 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 51/198 (25.76%), Postives = 69/198 (34.85%), Query Frame = 2
Query:  110 AEDVYIKVLYCGICHTDIHQIKNDLGM-SNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYL 700
            + ++ I V Y G+CHTD+H  K D  + +  P+                   +              C NC  CE   E  C        D    G    G F +    D      IP G  L Q AP+LCAGVTV+  L    +K                     AKAMG  V  I   + K  E  + LG + ++
Sbjct:   31 SNELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCP-------DADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALKTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKE-ELFKSLGGEVFI 220          
The following BLAST results are available for this feature:
BLAST of CF838169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
ADH1_CANAL4.137e-1225.00Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH1_EMENI5.403e-1224.55Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH4_KLULA2.053e-1126.77Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH2_KLULA2.053e-1126.34Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH1_KLULA2.682e-1125.76Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH2_KLUMA5.974e-1125.76Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05N21_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838169 ID=CF838169; Name=CF838169; organism=Citrus sinensis; type=EST; length=786bp
GTCACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAACGATGGGGTGGG
CTGCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGA
AACACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTG
CCACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATC
CGATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCA
GAAGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGT
TGGTTGTTGCAGAAACTGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACT
GCAATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCT
ACACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGT
GAAAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTG
CTGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGC
GGGCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGT
TTTGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCTG
ATAAGAAAAGAGTGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTT
GTCAGCTCCGACGCAACTCGTATGCAAGAAGCCGCTGACTCACTTGATTA
TATCATTGATACCGGGCCCGCAAATCACCCTCTGGA
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