CF838344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_ECO27 (Inner membrane protein oxaA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=oxaA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GW FIS+ + +LK + + ++GF+II++T IV+ +PLTK Q S M+ LQPKI+A+++R +++RI E LY+ VNPL GC P L +P+++ LY L Sbjct: 331 GWLWFISQPLFKLLKWIHSFVG------NWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYML 440
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_ECO24 (Inner membrane protein oxaA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=oxaA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GW FIS+ + +LK + + ++GF+II++T IV+ +PLTK Q S M+ LQPKI+A+++R +++RI E LY+ VNPL GC P L +P+++ LY L Sbjct: 331 GWLWFISQPLFKLLKWIHSFVG------NWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYML 440
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_BRAJA (Inner membrane protein oxaA OS=Bradyrhizobium japonicum GN=oxaA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 44/117 (37.61%), Postives = 74/117 (63.25%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L Sbjct: 369 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKMKSIQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVL 478
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA1_BACSU (Membrane protein oxaA 1 OS=Bacillus subtilis GN=oxaA1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 43/115 (37.39%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 315 ISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAG----NQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 +SE + +V K+ D +YG +IIL+T+++++ PL KQ+ S+ AMQ LQP+++ ++++Y+ Q+++Q ET L+++ GVNPLAGC P L +P+ IG Y A+ Sbjct: 46 LSELITYVAKLTGD---------NYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAI 151
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_ERWCT (Inner membrane protein oxaA OS=Erwinia carotovora subsp. atroseptica GN=oxaA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GW FIS+ + +LK L I ++GF+II +T IV+ +PLTK Q S M+ LQPK++A+++R +++R+ E LY+ VNPL GCLP + +P+++ LY L Sbjct: 329 GWLWFISQPLFKLLKFLHGFIG------NWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDKQRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYML 438
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_EDWI9 (Inner membrane protein oxaA OS=Edwardsiella ictaluri (strain 93-146) GN=oxaA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16 Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GW FIS+ + +L+++ + ++GFAII++T IV+ +PLTK Q S M+ LQPK++A+++R +++R+ E LY+ VNPL GC P L +P+++ LY L Sbjct: 326 GWLWFISQPLFKLLQLIHSFVG------NWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDKQRMSQEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYML 435
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_BORRA (Inner membrane protein oxaA OS=Borrelia recurrentis (strain A1) GN=oxaA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16 Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 312 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 653 F+ M+ +++I + I ++G +I+ LT++V++ FPLT K +T + LQPK+K IQ ++ + +R+ E +LYR+ GVNP+ GC P L +PV+ LY ++N Sbjct: 322 FLQVPMQLIMQIFYNVIP------NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKSDPKRLNEEMGKLYREEGVNPIGGCFPILLQLPVFFALYGLVNN 429
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_BORGA (Inner membrane protein oxaA OS=Borrelia garinii GN=oxaA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16 Identity = 40/118 (33.90%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 303 WFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 656 W+ I M+ V+++ D I ++G +II LT++V++ FPLT K +T + LQPK+K +Q ++ + +++ E RLY++ GVNPL GC P + +P++ LY ++N+ Sbjct: 322 WY-LIQVPMQMVMQVFYDVIP------NWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNL 432
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_PHOPR (Inner membrane protein oxaA OS=Photobacterium profundum GN=oxaA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16 Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 647 GW FI+ + +L ++ + ++G AI++LT IV+ A +PLTK Q S M+ LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P++I LY +L Sbjct: 326 GWLWFIASPLHKLLSFIQSIVG------NWGLAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFIALYWSL 435
BLAST of CF838344 vs. ExPASy Swiss-Prot
Match: OXAA_PEDPA (Membrane protein oxaA OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=oxaA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16 Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 384 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRY----AGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFF 689 +YG+ II+ T+I+++ PL Q +T+ LQPK+K +QQ+Y A +Q++++ E +LY +AGVNP+AGCLP + +PV LY A+S +L EG F Sbjct: 58 NYGWGIIVFTIIIRIIILPLMIYQTRTTMKTAELQPKLKQLQQKYSSRDAESQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQ---VLKEGTF 160 The following BLAST results are available for this feature:
BLAST of CF838344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838344 ID=CF838344; Name=CF838344; organism=Citrus sinensis; type=EST; length=748bpback to top |