CF838347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: HUB1_DEBHA (Ubiquitin-like modifier HUB1 OS=Debaryomyces hansenii GN=HUB1 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.461e-22 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 243 MIEV+ NDRLGKK++VKC DTIGDLKK+++ Q GT +KI ++K Y +YKDHITL DYE+H+G ELYYS Sbjct: 1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDYEVHNGFNFELYYS 73
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: HUB1_CANGA (Ubiquitin-like modifier HUB1 OS=Candida glabrata GN=HUB1 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 243 MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G + KI +QK ++ KDHITL DYE+HD LELYYS Sbjct: 1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDYEVHDNTNLELYYS 73
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: HUB1_YEAST (Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae GN=HUB1 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.898e-20 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 240 MIEVV+NDRLGKKVRVKC +D++GD KK+++ Q GT+ +KI +QK ++ KDHI+L+DYE+HD LELYY Sbjct: 1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELYY 72
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: HUB1_KLULA (Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis GN=HUB1 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.898e-20 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 240 MIEV++NDRLGKKV VKC +DT+GD KK+++ Q GT A KI +QK ++ KDHITL+DYE+HDG LELYY Sbjct: 1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLEDYEVHDGTNLELYY 73
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: UBL5_DICDI (Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.920e-19 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKD--------------YEIHDGMGLELYYS 243 MIEVV NDRLG KVRVK N DDTIGDLKK+++AQ G +A+KIR+QK Y+I+KD + YEIHDG GLELYY+ Sbjct: 1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDRNNNNNYNNYNNNNNNYYYYYEIHDGDGLELYYN 87
BLAST of CF838347 vs. ExPASy Swiss-Prot
Match: HUB1_ASHGO (Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN=HUB1 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.318e-18 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 1 Query: 25 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 240 MIEV++NDRLGKK+RVKC D++GDLKK++A Q GT K+ + K KDHI+L DYE+HDG LELYY Sbjct: 1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDYEVHDGTYLELYY 72 The following BLAST results are available for this feature:
BLAST of CF838347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838347 ID=CF838347; Name=CF838347; organism=Citrus sinensis; type=EST; length=548bpback to top |