CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.030e-36 Identity = 71/156 (45.51%), Postives = 107/156 (68.59%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 545 K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R V+ ++ A +++ GL F+ETSA ATN+ F I Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTI 169
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.049e-35 Identity = 84/198 (42.42%), Postives = 115/198 (58.08%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP------NPSGMVLM-DRP--GERTASASCCS 644 KL+L+GD GKS +LRF +++ STIG F +T+ V TVK +IWDTAGQER+ ++ YYRGA IIVYDIT+ SF K+W+ E+ N ++ L GNK DL + R V AQAYAQE G+ F+ETSAK + NV + F ++ + + + PS +V M RP E+ S+ CCS Sbjct: 10 KLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.049e-35 Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 563 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + + NMV+ L GNK+DL R V EE +A+A+E+GL FMETSAKTA NV + + AK + R Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYR 169
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.370e-35 Identity = 79/190 (41.58%), Postives = 120/190 (63.16%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGMVLMDRPGERT 623 K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++ YDIT + +F+ ++W++EL+ + N+V+ LAGNK+DL R V+ ++ QA ++ GL F+ETSA A NV+ DI++ I+K+ Q A + + PG+ T Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTAL-----PGQGT 198
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.370e-35 Identity = 79/196 (40.31%), Postives = 118/196 (60.20%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN----PSGMVLMDRP---GERTASASCCS 644 K +++GD+G GKS L+ +F + +F+ TIG F ++ + VN+ +K +IWDTAGQER+ ++ YYRGAA A++VYDIT + ++ W+ + + NPN V+ L GNK DL R VT EEA A+A++NGL F+E+SAKT NV + F AK + + N P G + + P ++ AS CS Sbjct: 10 KYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGGITKNPPQTITDKPQDASKCS 205
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35 Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 3 Query: 66 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 ++ +K+VLLG GK++L LR+V G F + STIGA+F ++T+ + +K+ IWD+AGQ+R+ SLA +YYRGA AI+V+DIT Q +F+ K WV+EL+A ++M L GNK DL R+V +E A+ YA E ++ETSAK V +F EI K+L Sbjct: 7 SMESKVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35 Identity = 79/177 (44.63%), Postives = 114/177 (64.41%), Query Frame = 3 Query: 30 RSEHPMATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA-LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 R+ P A + KLVLLG GKSSL LR+VK F T+G AFF++ + V ++K EIWDTAGQE+YHS+ +Y+RGA AA++VYDIT + SF +A++W+++L+ + +P V+ L GNK DL R+VT +E + +A L FMETSAK V+++F +A+ L Sbjct: 6 RTPQPRAAPSQPRV-FKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.205e-35 Identity = 75/192 (39.06%), Postives = 117/192 (60.94%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL----PRVQPAPNPSGMVLMDRPGERTASASCC 641 KL+L+GD G GKS L+LRF + QF +TIG F +T+ + + VK ++WDTAGQER+ ++ YYRGA ++VYD+T++ SF + W Q +Q+ N + + L GNK DL + R V+ E+ QA A + G+ F+E S+KT NV + FY +A R+ + + + SG + + GE +++ CC Sbjct: 13 KLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNESGSGGINI-AEGEENSASKCC 203
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 5.205e-35 Identity = 67/160 (41.88%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD G GKS L+L+F +F + TIG F ++ + +++ +K +IWDTAGQE + S+ YYRG+A A++VYDIT + +F W+++ ++ N NM + L GNK+D+ R V+ EE + +A ENGL F+ETSAKTA+NV + F A ++ Sbjct: 7 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKI 166
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB17_MOUSE (Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.205e-35 Identity = 75/171 (43.86%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 48 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 +T + +KLVLLG GK+SL LR++K F T+G AFF++ L + +++K EIWDTAGQE+Y S+ +Y+RGA AA++VYDIT + SF +A++W+++L+ + P +V+ L GNK DL + R+VT +E + +A+ L FMETSAK V++IF +A+ L Sbjct: 11 STASGQPYVSKLVLLGSSSVGKTSLALRYMKQDFSNVLP-TVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESKSLLFMETSAKLNYQVSEIFNTVAQEL 180 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |