CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.878e-35 Identity = 68/157 (43.31%), Postives = 101/157 (64.33%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 548 K +++GD G GKS L+L+F +F + TIG F ++ + +++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NM + L GNK DL R V+ EE + +A+E+GL FME SAKTA NV + F + A Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.160e-34 Identity = 81/195 (41.54%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGMVLMDRPGERTAS---ASCC 641 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+ E+ N+ L GNK+DL R V+ + A+ +A+ G+ F+ETSAK A NV F +I KR+ AP +G+ L PG++ S + CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPK-AGVKL--TPGQQVPSNGGSKCC 201
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.160e-34 Identity = 72/161 (44.72%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K++++GD G GKSSL+LRF + E STIG F +T+ +++ T+K +IWDTAGQER+ ++ YYRGA I VYD+TN+ SF+ + W+Q++ N+ L GNK DL+D+R V A+EA+ A++N + ++E SAKT +NV F IAK L Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKAL 169
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.160e-34 Identity = 74/173 (42.77%), Postives = 109/173 (63.01%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK----RLPRVQPAPNP 584 K++L+GD G GKS L+LRF + + STIG F +TL ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD T+Q SF K+W+ E+ N+ L GNK DL++ + V + +A+++A+ G+ F+ETSAK ATNV + F +A+ RL +Q P P Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPKP 184
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6C_HUMAN (Ras-related protein Rab-6C OS=Homo sapiens GN=RAB6C PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS----GMVLMDRPGERTASASCCS 644 GN KLV LG+ K+SL+ RF F ++ IG F S+T+ + D T+ +WDTAGQER SL P Y R +AAA++VYDITN SF++ KW+ +++ + ++++ L GN+ DL D R+V+ EE + A+ + F+ET AK NV +F +A LP ++ + S + +++P E+T S CS Sbjct: 8 GNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSDIKLEKPQEQTVSEGGCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 68/157 (43.31%), Postives = 101/157 (64.33%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 548 K +++GD G GKS L+L+F +F + TIG F ++ + +++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NM + L GNK DL R V+ EE + +A+E+GL FME SAKTA NV + F + A Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 79/195 (40.51%), Postives = 115/195 (58.97%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-------PRVQPAPNPSGMVLMDRPGERTASASC 638 K++++GD G GKSSL+LRF + E STIG F +T+ +++ T+K +IWDTAGQER+ ++ YYRGA I VYD+TN+ SF+ + W+Q++ N+ L GNK DL ++R V+A+EA+ A++N + ++E SAKT +NV F IAK L P PA S P R + SC Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPASTVSLNTASKVPTNRGLTDSC 203
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.978e-34 Identity = 68/170 (40.00%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 587 K+VL+GD G GKS+L+ RF + +F +STIG F ++T+ T+K ++WDTAGQERY ++ YYRGA A++VYDI QA+++ ++W+ EL+ + N+ + L GNK+DL R+V+ +EA+ +++++ L F+ETSA ++NV F I ++ + P+ S Sbjct: 15 KIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHS 184
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.978e-34 Identity = 70/160 (43.75%), Postives = 107/160 (66.88%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD GKS+L+L+FV +F + TIG F S+++ +ND +K +IWDTAGQE++ S+ YYRGA A+IVYDIT + SFE W+ + + + ++ L GNKADL R+V+ EA+ +A++NGL F ETSAKTA NV++ F + +++ Sbjct: 26 KYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.978e-34 Identity = 78/192 (40.62%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q S+ K+W+QE+ + N+ L GNK+DL + V A+ +A G+ F+ETSAK ATNV F EI KR+ + + +D ++AS CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKSASGGCC 201 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |