CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34 Identity = 69/164 (42.07%), Postives = 109/164 (66.46%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 KLV LGD GK+S++ RF+ +F + TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R ++ AI+VYD++N+ +F KW++++ + +G N+++ L GNK DL++ R+V+ E + +E G+ F+ETSAK N+ +F +IA LP V Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGV 174
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34 Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 560 K +++G G GKS L+ +F++ +F + TIG F S+ + V TVK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + +PN+V+ L GNK DL R+VT EA +AQEN L F+ETSA T NV + F + A+ +P Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIP 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34 Identity = 76/204 (37.25%), Postives = 120/204 (58.82%), Query Frame = 3 Query: 66 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----PRVQPAPNPSGMVLMDR-------PGERTASASCC 641 N K+VL+G+ G GK++L+ RF + +F +TIG F ++T+ + A VK +IWDTAG ERY ++ YYRGA A++V+D+T ++ ++W++EL +V+ L GNK+DL AR+V EEA+ +A+ NGL F+ETSA +TNV F + K + ++Q +P + + L PG++ A CC Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNSPRSNAIALGSAQAGQEPGPGQKRA---CC 210
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34 Identity = 78/192 (40.62%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q S+ K+W+QE+ + N+ L GNK+DL + V A+ +A G+ F+ETSAK ATNV F EI KR+ + + +D + AS CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPASGGCC 201
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34 Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK+DL + V A+ YA + G+ F+ETSAK ATNV F +A + Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 3.374e-34 Identity = 70/156 (44.87%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 545 K+VL+GD G GKS+L+ RF +F +STIG F ++T+ V + +K +IWDTAGQERY ++ YYRGA A+IVYDI+ +S+E W+ EL+ + N+ + L GNK+DL R V +EA+ +A EN + F ETSA + NV+ F E+ Sbjct: 15 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFREL 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.374e-34 Identity = 77/200 (38.50%), Postives = 115/200 (57.50%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF----YEIAKRLPRVQPAPNP-------SGMVLMDRPGERTASASCCS 644 K+V++GD GKS+L+ R+ + +F ++TIG F +Q++ ++ VK +IWDTAGQER+ ++ YYRGA A++VYDIT ++FE +W+ EL + + L GNK DL R V+ EE ++ A+ GLFFMETSA +TNV F EI + R Q + + + L+ E T + SCCS Sbjct: 14 KIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKNENEGTKTFSCCS 213
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB41_HUMAN (Ras-related protein Rab-41 OS=Homo sapiens GN=RAB41 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 4.406e-34 Identity = 70/170 (41.18%), Postives = 110/170 (64.71%), Query Frame = 3 Query: 75 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 584 +KL+ LG+ GK+S++ RF+ F ++T+G F S+T+ + D V+ ++WDTAGQER+HSL P Y R + A++VYDITN SF+ KWV+ ++A+ ++V+ L GNK DL + R+VTAE+ + ++ + F+ETSAKT NV +F +A L + +P P Sbjct: 32 SKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPPP 201
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.406e-34 Identity = 78/193 (40.41%), Postives = 110/193 (56.99%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRL-PRVQPAPNPSGMVLMDRPGERTASASCC 641 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV F EI KR+ P + V + +++ CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGGGCC 202
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 5.755e-34 Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG----MVLMDRPGERTASASCC 641 KL+L+GD G GKS L+LRF + E STIG F QT+ ++ T+K +IWDTAGQER+ ++ YYRGA ++VYD+T+Q S+ K+W+QE+ + N+ L GNK+DL + V A+ +A G+ F+ETSAK ATNV F +A + + SG + +D + A CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGERPNLKIDSTPVKPAGGGCC 201 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |