CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.872e-33 Identity = 74/203 (36.45%), Postives = 117/203 (57.64%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-------------QPAPNPSGM-VLMDRPGERTASASCCS 644 K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYDIT++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK + ++F ++ KR+ QP G+ ++ D P ++ CCS Sbjct: 18 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEPQAQSVGGGCCS 220
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.872e-33 Identity = 74/198 (37.37%), Postives = 116/198 (58.59%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGMVLMDR-----PGERTASASCC 641 KL+L+GD G GKS L+LRF G F +TIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA ++VYD+T+++SF + W++ ++ + N+ L GNKAD+ ++ R V + QA A E G+ F ETSAKT NV ++F+ +I +RL P+ + + G+ T ++CC Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACC 214
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33 Identity = 72/195 (36.92%), Postives = 118/195 (60.51%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-------VQPAPNPSGMVLMDRPGERTASASCC 641 K++L+GD G GKS L++RFV+ +F +TIG F +T+ +N VK ++WDTAGQER+ ++ YYRGA I+VYD+T++ +F K+W + + N + L GNK+D ++ R VTA++ +A A+E G+ F+E+SAK NVN+IF+ +AK + V G + ++ ++ ++CC Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33 Identity = 66/160 (41.25%), Postives = 99/160 (61.88%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++G GKS L+ RF+ +F TIG F S+ + + VK +IWDTAGQER+ S+ YYRG+A +VYD+TN+ S+ W+ ++++ +P++ + L GNKADL + R+VT EA AQENGL FMETSA T V ++F + + + Sbjct: 9 KFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTI 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33 Identity = 70/161 (43.48%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVNDIFYEIAKRL 557 K++L+GD GK+ +V RF G F Q++TIG F + + +N VK ++WDTAGQER+ ++ YYR A AII YDIT + SFE W+ E + G N++M L GNK+DL + R++ EEA A+++GL +ETSAK + NV+++F +AK L Sbjct: 17 KIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKEL 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 8.310e-33 Identity = 69/182 (37.91%), Postives = 105/182 (57.69%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK----RLPRVQPAPNPSGMVLMDRP 611 K + +GD G GKSS++LRF + F E STIG F +T+ + +K +IWDTAGQER+ YRG A ++VYD+T+Q SFE KW+QE++ N++ + GNK+D++ + V AQ +A + F ETSAK A N+ D F + K R+ +P+ S +++ +P Sbjct: 10 KFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSSSTIILKKP 191
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 8.310e-33 Identity = 76/193 (39.38%), Postives = 113/193 (58.55%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR--PGER---TASASCC 641 KL+L+GD G GKS L+LRF + E STIG F +T+ +N T+K +IWDTAGQER+ ++ YYRGA I+VYD+T++ +FE ++W+QE+ N+ L GNK+DL+ + V A+A+A + F+ETSAK +TNV F +A + A P+ V ++ PG + + CC Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.310e-33 Identity = 70/161 (43.48%), Postives = 105/161 (65.22%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVNDIFYEIAKRL 557 K++L+GD GK+ +V RF G F++ Q++TIG F ++L +N VK ++WDTAGQER+ ++ YYR A AII YDIT + SFE W+ E G N+++ L GNK+DL + R++ EEA A+++GL +ETSAK + NV+++F +AK L Sbjct: 17 KIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKEL 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.085e-32 Identity = 69/158 (43.67%), Postives = 105/158 (66.46%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 551 K++L+GD G GKS L++RFV+ +F +TIG F +T+ +N VK ++WDTAGQER+ ++ YYRGA I+VYD+T++ +F K+W + + N + L GNK+D +D R VT E+ +A A+E GL F+E+SAK NVN+IF+ +A+ Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSD-MDTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLAR 178
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.085e-32 Identity = 82/202 (40.59%), Postives = 118/202 (58.42%), Query Frame = 3 Query: 45 MATTGN-KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQE-STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-PRVQPAPNPSGMVLMDRPGERTASASCC 641 + +TG+ ++ K++L+GD G GK+ L++RF G F+ ST+G F ++ L V+ VK +IWDTAGQER+ S+ YYR A A +++YDITN+ SF+ + W+ E+Q ++V+ L GNK D R V E+ + A+E GL FMETSA+T NV+ F IAK L R AP+ L D SCC Sbjct: 57 LGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFRLHDYVKREGRGVSCC 258 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |