CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.037e-51 Identity = 110/176 (62.50%), Postives = 130/176 (73.86%), Query Frame = 3 Query: 48 ATTGNKN---INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 560 + T KN IN KLVLLGD GKSSLVLRFVK QF +++ESTIGAAF +QTL +++ T VK EIWDTAGQERY SLAPMYYR A AI+VYDIT AS E+AK W++ELQ Q +V+ALAGNK DL R+ V +A+AYA E L F ETSAKTA NVN++F IAK+LP Sbjct: 3 SNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.661e-47 Identity = 93/164 (56.71%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD---ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 560 KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+L RKV EE + A+E GL F ETSAKT NVND+F I +++P Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.011e-46 Identity = 96/189 (50.79%), Postives = 130/189 (68.78%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P AS CC Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKP-TMQASRRCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.560e-46 Identity = 94/188 (50.00%), Postives = 125/188 (66.49%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + AS CC Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGNQSLQASRRCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.907e-45 Identity = 95/190 (50.00%), Postives = 125/190 (65.79%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR--VQPAPNPSGMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R+V +A+ YA F+ETSAK A N+N++F EI++R+P PA G L +P E SCC Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQPSE--PKRSCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.907e-45 Identity = 93/188 (49.47%), Postives = 124/188 (65.96%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + A CC Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKLGNQSLQAGRRCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB22A_CANFA (Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.253e-45 Identity = 92/188 (48.94%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQE + +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V +A+ YA F+ETSAK A N+N++F EI++R+P P G R SCC Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGKGFKLRRQPSEPQRSCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.248e-45 Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGERTASASCC 641 K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V +A+ YA F+ETSAK A N+N++F EI++R+P A PS G L +P E SCC Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSGGKGFKLRRQPSE--PKRSCC 194
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.860e-41 Identity = 93/189 (49.21%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KFEIWDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L GNK DL R ++ EEA+ YAQE GL F E SAKT V +IF +I ++L Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKL 193
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.150e-40 Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRL 557 KLVLLG++ GK+ + R V+ +F +STIGAAF +++ V++ +K EIWDTAGQERY SL PMYYRGAAAA++VYDIT + +FE K+WV ELQ +PN+++ALAGNK DL + R+V +E Y E G F ETSA + N+N++F EI +RL Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-REVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |