CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.197e-39 Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCCS 644 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS CS Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.197e-39 Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCCS 644 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS CS Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.197e-39 Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCCS 644 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS CS Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.667e-39 Identity = 77/163 (47.24%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQERY ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R V+ EEAQA+A EN L F+ETSA A+NV + F + + R+ Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRI 174
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.667e-39 Identity = 78/163 (47.85%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL V E+ ++YA++ L FMETSA ATNV D F E+ ++ R+ Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.667e-39 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQERY ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL V EEA+A+A+ L+FMETSA ATNV + F E+ ++ ++ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKI 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.941e-39 Identity = 78/163 (47.85%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL V E+ +++A+ L+FMETSA ATNV + F E+ ++ R+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRI 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.013e-38 Identity = 81/189 (42.86%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL--MDRPGERTASASC 638 KLV LG+ GK+SL+ RF+ QF ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R ++ AIIVYDITN SF +KW+++++A+ ++++ L GNK DL D R+VT EE + A+E + METSAK NV +F +IA+ LP ++ S ++ +P E +S +C Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQMIDVSIQPNENESSCNC 201
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 1.324e-38 Identity = 80/200 (40.00%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD----RPGERTASASCCS 644 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++WDTAGQER+ SL P Y R +AAA++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP ++ + S ++D +P E+ S CS Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEKPQEQPVSEGGCS 207
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.729e-38 Identity = 84/201 (41.79%), Postives = 122/201 (60.70%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPSGMVLMDRPGERTA--SASCCS 644 KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R V+ E+A+A+A+ FFMETSA + NV + F E+ + +V PA P G + + +A CCS Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCS 216 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |