CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAS2_PHYPO (Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 57/161 (35.40%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 KLV++G G GKS+L ++ ++ FI+ + TI ++ Q + +++ T +I DTAGQE Y ++ Y R ++VY IT+++SF+ + ++ L+ + + M LAGNK DL R+VT E Q A+ G F+ETSAK NV + FY + + + Sbjct: 7 KLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYRKQVV-IDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFVMVYSITSRSSFDEINAFREQILRVKDKDTVPMVLAGNKCDLASERQVTTNEGQELARAFGCPFVETSAKARLNVEECFYGLVREI 166
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP2C_MOUSE (Ras-related protein Rap-2c OS=Mus musculus GN=Rap2c PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ + V+++F EI +++ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELFAEIVRQM 164
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP2C_HUMAN (Ras-related protein Rap-2c OS=Homo sapiens GN=RAP2C PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ + V+++F EI +++ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELFAEIVRQM 164
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP2C_BOVIN (Ras-related protein Rap-2c OS=Bos taurus GN=RAP2C PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K+V+LG G GKS+L ++FV G FIE + TI F+ + + V+ + EI DTAG E++ S+ +Y + I+VY + NQ SF+ K ++ + + + + L GNK DL R+V + E +A AQE G FMETSAK+ + V+++F EI +++ Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELFAEIVRQM 164
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 61/171 (35.67%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 51 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 524 T G+ + KL+ LGD G GK++ + R+ +F +T+G F + + N V ++WDTAGQER+ SL ++R A ++++D+T+Q SF + W+ +LQA NP++V L GNKADL D R+V +A+ A + G+ + ETSA T NV Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 51 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----------TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 524 T G+ + KL+ LGD G GK++ + R+ +F +T+G F + +A N V ++WDTAGQER+ SL ++R A ++++D+T+Q SF + W+ +LQA NP++V L GNKADL D R+V +A+ A++ + + ETSA T NV Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNV 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 65/198 (32.83%), Postives = 107/198 (54.04%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN----------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG---NPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND----IFYEIAKRLPR-VQPAPNPSGMV 596 G+ + K + LGD G GK+S++ ++ G+F +T+G F + + + ++WDTAGQER+ SL ++R A ++++D+TN+ SF + W+ +LQ NP++V L GNK+DL D R V EEA+ A++ G+ + ETSA TN++ + I KR+ R V + P G+V Sbjct: 4 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIV--LCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRMERCVDKSWIPEGVV 199
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RASEF_XENTR (RAS and EF-hand domain-containing protein OS=Xenopus tropicalis GN=rasef PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 56/169 (33.14%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQEN---------GLFFMETSAKTATNVNDIFYEIAKRL 557 K+VL GD GKSS ++R K +F +T+G F +TL V+ ++WDTAGQER+ S+A Y+R A +++YD+T + SF ++W+ ++ + + + + GNKADL R++ AE+ N G F ETSAK +N+ + +A+ + Sbjct: 524 KIVLAGDAAVGKSSFLMRLCKNEFRGNTSATLGVDFQMKTLVVDGEPTILQLWDTAGQERFRSIAKSYFRRADGVLLLYDVTCEKSFLNVREWIDMIEDATSEAIPIMMVGNKADL---RQLMAEQGHICVSTNYGEKLSRTYGALFCETSAKEGSNIVEAVLHLAREV 689
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 61/169 (36.09%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 578 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ + L GNK DL D R V E+ Q A++ N F+E+SAK+ NVN+IFY++ +++ R P P Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRKTPVP 172
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22 Identity = 61/191 (31.94%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG-NPN-----MVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTAS 629 KL+L+GDV GK+S++ R + +F E +STIGA F S+T ND ++WDTAGQE+Y L ++R + A I+V+DI+N++SF W ++ +++ NP+ + + L NK+D L R V E + ++ + + E SAK++ N+ + ++ + + ++ + D P E T+S Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLANKSDSL-TRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVI--IEQDKDSDNEQFNDSPDEETSS 198 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |