CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALBA_XENLA (Ras-related protein ralB-A OS=Xenopus laevis GN=ralb-A PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 61/205 (29.76%), Postives = 114/205 (55.61%), Query Frame = 3 Query: 45 MATTGNKNINA----KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 MA NKN ++ K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R ++V+ IT SF ++ ++ L+ + + + + + GNK+DL D R+V +EA+ A+E G+ ++ETSAKT NV+ +F+++ + + + + N ++ CC Sbjct: 1 MAANKNKNQSSLVLHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLIVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKSGKSKKGFKQRCC 204
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 52/169 (30.77%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 81 LVLLGDVGAGKSSLVLRFVKGQF-IEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-QPAPN 581 ++L+GD GKSS++ RF QF + + S I F++ + + + + +DTAGQE++ +L+ YYR A ++ YDI NQ +F+ +W++E+ PN+ + + NK DL + R V A+ +A + + +E SAK + V + F ++A + + +P P+ Sbjct: 53 IILIGDQATGKSSVLQRFKNNQFEVCHKPSPIIIDCFTKKIQIEGKKISLKCYDTAGQEKFRALSQSYYRCADGIMLFYDIANQKTFDNVGRWLEEVHRLAGPNVPILIIANKCDLNEKRVVNFNNAKKFADDKNIPIIEVSAKESLGVEEAFIKLASEINKTWKPLPD 221
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 58/176 (32.95%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVNDIFYEIAKRLPR 563 G+++ K++++GD GK+SLV R+ + F + +ST+G F + L +D V+ ++WD AGQER+ S+ +YYR A+A +I++D+TN +F +++W Q+L ++ G P + LA NK D L V+ ++ +++ENG + ETS K N+N+ + +++ R Sbjct: 2 GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLA-NKCD-LSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMR 175
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB7L_HUMAN (Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 58/176 (32.95%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 57 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVNDIFYEIAKRLPR 563 G+++ K++++GD GK+SLV R+ + F + +ST+G F + L +D V+ ++WD AGQER+ S+ +YYR A+A +I++D+TN +F +++W Q+L ++ G P + LA NK D L V+ ++ +++ENG + ETS K N+N+ + +++ R Sbjct: 2 GSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLA-NKCD-LSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMR 175
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21 Identity = 49/164 (29.88%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 60 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 551 N N + +L ++GD G GK+S+ ++F+ F+ + TI + Q L ++D +I DTAGQ+ +++ + + I+VY +T+++SF++ + ++ +++ + + + + NK+DL D R+VT +E + +A G+ FME SAK N++++F +IA+ Sbjct: 10 NNNNSMRLCVMGDGGVGKTSITIQFISNHFVNCYDPTIEDLYRKQCL-IDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIAQ 172
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21 Identity = 58/171 (33.92%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 587 KLV++G G GKS+L ++F++ FIE + TI ++ Q V++ T +I DTAGQ+ Y ++ Y R + VYD+T++ SFE +++ + + N + + L GNK DL + R+VT E A+ + F+ETSAK NV++ F+E+ + + + P S Sbjct: 8 KLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDSYRRQC-QVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSLKEPGRS 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 56/173 (32.37%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 51 TTGNKNIN-AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 563 TT N N KL ++GD G GK+S+ ++F+ F+ + + TI ++ Q L ++D +I DTAGQ+ ++ + R I+VY +T+++SF++ + + +++ + ++ + + GNK+DL D R+VT +E + A+ G+ FME SAKT NV ++F E + + R Sbjct: 2 TTNKSNGNLVKLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIEDSYRKQCL-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVEEVFNETVRCVKR 173
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_RAT (GTP-binding nuclear protein Ran OS=Rattus norvegicus GN=Ran PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |