CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_PONAB (GTP-binding nuclear protein Ran OS=Pongo abelii GN=RAN PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_MOUSE (GTP-binding nuclear protein Ran OS=Mus musculus GN=Ran PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_MACFA (GTP-binding nuclear protein Ran OS=Macaca fascicularis GN=RAN PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_HUMAN (GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_CANFA (GTP-binding nuclear protein Ran OS=Canis familiaris GN=RAN PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAN_BOVIN (GTP-binding nuclear protein Ran OS=Bos taurus GN=RAN PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G + KLVL+GD G GK++ V R + G+F + +T+G N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N F +A++L Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALBB_XENLA (Ras-related protein ralB-B OS=Xenopus laevis GN=ralb-B PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 61/205 (29.76%), Postives = 114/205 (55.61%), Query Frame = 3 Query: 45 MATTGNKNINA----KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 MA NKN ++ K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R ++V+ IT SF ++ ++ L+ + + + + + GNK+DL D R+V +EA+ A+E G+ ++ETSAKT NV+ +F+++ + + + + N ++ CC Sbjct: 1 MAANKNKNQSSLVLHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREVRTKKMSENKDKNGKKSGKSKKGFKQRCC 204
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALB_PONAB (Ras-related protein Ral-B OS=Pongo abelii GN=RALB PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21 Identity = 56/190 (29.47%), Postives = 109/190 (57.37%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R ++V+ IT SF ++ ++ L+ + + + + + GNK+DL + R+V EEA++ A+E G+ ++ETSAKT NV+ +F+++ + + + + N +++ CC Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKSSKNKKSFKERCC 204
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALB_HUMAN (Ras-related protein Ral-B OS=Homo sapiens GN=RALB PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21 Identity = 56/190 (29.47%), Postives = 109/190 (57.37%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R ++V+ IT SF ++ ++ L+ + + + + + GNK+DL + R+V EEA++ A+E G+ ++ETSAKT NV+ +F+++ + + + + N +++ CC Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKSSKNKKSFKERCC 204 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |