CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAPA_DICDI (Ras-related protein rapA OS=Dictyostelium discoideum GN=rapA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21 Identity = 59/172 (34.30%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASF-ERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 587 K+V+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + ++VY I + ++F E Q L+ + ++ M L GNK DL D R ++ E+ + A++ G +F+E SAK NV IFY + +++ R P PS Sbjct: 7 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDSNQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKCDLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPS 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RANT_RAT (GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21 Identity = 58/171 (33.92%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 MA G I KLVL+GD G GK++ + R + G+F + +T+G + N +KF +WDTAGQE++ L YY A AII++D+T++ +++ W ++L + N+ + L GNK D+ D KV A+ + ++N L + + SAK+ N F+ +A++L Sbjct: 1 MAGQGKPQIQFKLVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDL-VRVCENIPIVLCGNKVDIKD-MKVKAKPILFHRKKN-LQYYDISAKSNYNFEKPFFWLARKL 168
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RABH_DICDI (Ras-related protein RabH OS=Dictyostelium discoideum GN=rabH PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21 Identity = 53/162 (32.72%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 66 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 551 NI KL ++GD GKSSL+ RF F E + ++G FF +T+ + ++ +I DT+G E++ SL +Y +IVYDI++Q +FE K W+ E + + + +K D L+ + V + ++YA L F ETS+K + NV + F + + Sbjct: 5 NIKLKLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQITDTSGMEKFRSLNNSFYSNLDGILIVYDISDQETFENTKLWLNEANKLAPKDCIKIIVASKFD-LENKVVDSNIVKSYADNLNLKFFETSSKNSINVEETFITLVE 165
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 52/172 (30.23%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 54 TGNKNIN-AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 563 +G KN N KL ++GD G GK+++ ++F+ F+ + + TI ++ Q + ++D +I DTAGQ+ ++ + R ++VY +T+++SF++ + +++ + + ++ + + GNK+DL D R+VT +E + A+ G+ FME SAKT +N+ ++F E + + R Sbjct: 2 SGYKNNNLVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCV-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVKR 172
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP1A_RAT (Ras-related protein Rap-1A OS=Rattus norvegicus GN=Rap1a PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 572 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ F+E+SAK+ NVN+IFY++ +++ R P Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTP 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP1A_MOUSE (Ras-related protein Rap-1A OS=Mus musculus GN=Rap1a PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 572 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ F+E+SAK+ NVN+IFY++ +++ R P Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTP 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP1A_HUMAN (Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1A PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 572 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ F+E+SAK+ NVN+IFY++ +++ R P Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTP 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAP1A_BOVIN (Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 572 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ F+E+SAK+ NVN+IFY++ +++ R P Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTP 170
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALB_MOUSE (Ras-related protein Ral-B OS=Mus musculus GN=Ralb PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 55/190 (28.95%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 641 K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R ++V+ IT SF ++ ++ L+ + + + + + GNK+DL + R+V +EA+ A+E G+ ++ETSAKT NV+ +F+++ + + + + N +++ CC Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKSEEDKIPLLVVGNKSDLEERRQVPVDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREIRAKKMSENKDKNGRKSSKSKKSFKERCC 204
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RALA_SAGOE (Ras-related protein Ral-A OS=Saguinus oedipus GN=RALA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 54/161 (33.54%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K++++G G GKS+L L+F+ +F+E E T A + + + ++ V+ +I DTAGQE Y ++ Y+R + V+ IT SF + ++ L+ + + N+ L GNK+DL D R+V+ EEA+ A + + ++ETSAKT NV+ +F+++ + + Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 175 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |