CF838391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.239e-36 Identity = 71/160 (44.38%), Postives = 106/160 (66.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD G GKS L+L+F +F + T+G F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NMV+ L GNK+DL R+V EE +A+A+E+GL FMETSAKTA+NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 153.68 bits (387), Expect = 1.239e-36 Identity = 82/207 (39.61%), Postives = 124/207 (59.90%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV--------NDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERT----------ASASCCS 644 K+VL+GD G GKS+++ RF + +F +STIG F ++T V T+K +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ +AGNK+DL R V E+ Q+ A++ GL F+ETSA ATNV +I++ I+K+ Q A + + PG+ T A +CCS Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAI----PGQGTTINVDDTSGGAKRACCS 216
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.618e-36 Identity = 71/164 (43.29%), Postives = 111/164 (67.68%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 569 KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R ++ A+IVYD+ ++ SF KW+ E++ + ++++ L GNK DL+D R+V+ EEA+A A+E + F+ETSAK N+ +F +IA LP ++ Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGME 174
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.618e-36 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++N L F+ETSA +TNV + F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.618e-36 Identity = 73/163 (44.79%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRI 175
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.618e-36 Identity = 75/194 (38.66%), Postives = 119/194 (61.34%), Query Frame = 3 Query: 54 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV--QPAPNPSGMVLMDRPGERTAS 629 T N KLV LG+ GK+S++ RF+ F ++TIG F S+T+ + D T++ ++WDTAGQER+ SL P Y R ++ A++VYDITN SF + KWV +++ + ++++ L GNK DL D R+V+ E+ + A++ + F+ETSAK NV +F +IA LP + + P +V+M+ P + S Sbjct: 5 TNNALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVIMNPPKDAEES 198
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.113e-36 Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + NPNM + L GNK DL R VT EE + +A+E+GL F+ETSA+TA NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.113e-36 Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + NPNM + L GNK DL R VT EE + +A+E+GL F+ETSA+TA NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: YPT6_YEAST (GTP-binding protein YPT6 OS=Saccharomyces cerevisiae GN=YPT6 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.113e-36 Identity = 76/177 (42.94%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 45 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLPRVQ 569 M+ +G K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++ ++WDTAGQER+ SL P Y R + AIIVYDIT + SFE KW+++++ +G+ N+++ + GNK+DL D R+++ EE + A+ G FMETS K NV +F +IAK LP Q Sbjct: 1 MSRSGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQ 177
BLAST of CF838391 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.113e-36 Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD+G GKS L+ +F + +F+ TIG F ++ + V+ +K +IWDTAGQER+ ++ YYRGAA A++VYDIT ++++ W+ + + NPN V+ L GNKADL R VT EEA+ +A+ENGL F+E SAKT NV D F E AK++ Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172 The following BLAST results are available for this feature:
BLAST of CF838391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838391 ID=CF838391; Name=CF838391; organism=Citrus sinensis; type=EST; length=855bpback to top |