CF838393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 353.599 bits (906), Expect = 7.363e-97 Identity = 168/266 (63.16%), Postives = 187/266 (70.30%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE +QAGGA+CPGGLCCSKFG+CG+T YC D F +LKHRND ACQGK FYTYDAF++AAK+F F +KREIAAFL QTSHETTGGWPTAPDGPYAWGYCF +EQ NP YCQ S ++PCA GK+Y+GRGPIQIS+NYNYG G+AI VDLL NPD VA DP ISFKTA WFWMTPQSPKPSCHDVITG W PS++D AGRLPGYG VTNIINGG+EC Sbjct: 20 AEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCSGSSGGGTLSSLISG---------------DTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQ-NPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLEC 269
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.142e-96 Identity = 161/266 (60.53%), Postives = 187/266 (70.30%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE +QAGGA CP LCCS++G+CG T +C RDLFE+LL HRND AC +GFYTY+AF+AAA +F AF RKRE+AAFL QTSHETTGGWPTAPDGP++WGYCFKQEQ P DYCQPS +WPCAPG+KY+GRGPIQ+S+N+NYGPAG+AI VDLL NPD VA D T+SFKTA WFWMTPQ KPS HDVITG+W PS +D AGR PGYGV+TNI+NGG+EC Sbjct: 32 AEQCGAQAGGARCPNCLCCSRWGWCGTTSDFC------GDGCQSQCSGCGPTPTPTPPSPSDGVGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLEC 291
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 2.798e-96 Identity = 166/263 (63.12%), Postives = 189/263 (71.86%), Query Frame = 3 Query: 18 SQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPG-DYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 SQAGGA+CP LCCS++G+CG+T AYC R LF+Q+L HRNDAAC K FYTYDAF+AAA +F +F RKRE+AAFLAQTSHETTGGW TAPDGPY+WGYCFK+E GN G DYC S QWPCA GKKY+GRGPIQISYNYNYGPAG+AI +LL NPD VA+D T+SFKTAFWFWMTPQSPKPSCH V+TGQW P+ +D AGR+PGYGVVTNIINGG+EC Sbjct: 25 SQAGGALCPNCLCCSQYGWCGSTSAYC----GSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVEC 283
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 8.141e-96 Identity = 163/266 (61.28%), Postives = 186/266 (69.92%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA CP LCCS+FG+CG+T YC R LF+++L HRND ACQ KGFYTYDAF+AAA +F F RKRE+AAFLAQTSHETTGGW TAPDG +AWGYCFKQE+G +YC PS QWPCAPGK Y+GRGPIQ+S+NYNYGPAG+AI VDLL NPD VA DPT+SFKTA WFWMT Q+PKPS H VITGQW PS +D AGR+PG+GV+TNI+NGGIEC Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYC--GDGCQSQCAGCGGGGTPVTPTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIEC 282
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 350.132 bits (897), Expect = 8.141e-96 Identity = 164/266 (61.65%), Postives = 187/266 (70.30%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGA CP LCCS+FG+CG+TP YC R LF+++L HRND ACQ KGFYTYDAF+AAA +F F RKRE+AAFLAQTSHETTGGW TAPDG +AWGYCFKQE+G +YC PS QWPCAPGK Y+GRGPIQ+S+NYNYGPAG+AI VDLL NPD VA DPT+SFKTA WFWMT Q+PKPS H VITGQW PS +D AGR+PG+GV+TNI+NGGIEC Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTP-YC----GDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIEC 279
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 347.051 bits (889), Expect = 6.891e-95 Identity = 161/262 (61.45%), Postives = 184/262 (70.23%), Query Frame = 3 Query: 18 SQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 SQAGGA+CP LCCS++G+CG+T YC LF+Q+L HRND AC KGFYTYDAF+AAA ++ F KRE+AAFLAQTSHETTGGWPTAPDGPY+WGYCFK+E GN YC+P +WPCA GKKY+GRGPIQI+YNYNYGPAG+AI DLL NPD VA+D T+SFKTAFWFWMTPQSPKPSCH VITGQW PSA D AGR+PGYG +TNIINGG+EC Sbjct: 23 SQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCSGGCGGGPTPPSSGGGSGVASIISP-----SLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVEC 279
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 346.665 bits (888), Expect = 9.000e-95 Identity = 166/269 (61.71%), Postives = 185/269 (68.77%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXX-RKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPG--DYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGAVCP LCCS+FG+CG+T YC R LF+Q+L HRNDAAC FYTYDAF+AAA +F F KRE+AAFLAQTSHETTGGW TAPDGPYAWGYCFK+E G DYCQ S QWPCA GKKY+GRGPIQ+SYN+NYGPAG+AI DLLG+PD VA+D T+SF TAFWFWMTPQSPKPSCH V TGQW PSA D AGR+PGYGV+TNIINGG+EC Sbjct: 21 AEQCGSQAGGAVCPNCLCCSQFGWCGSTSDYC---GAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLEC 286
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.005e-94 Identity = 160/266 (60.15%), Postives = 181/266 (68.05%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE QAGGA CP G+CCS FG+CGNT YC +F+Q+LKHRND CQGK FYTY+AFI AA+SF F RKRE+AAF AQTSHETTGGW TAPDG YAWGYC+ +EQGNP YC S QWPCAPG+KY+GRGPIQISYNYNYGP G+AI +LL NPD VA + +SFK+A WFWMT QSPKPSCHDVITG+W PSA+D A RLPGYGV+TNIINGG+EC Sbjct: 23 AEQCGKQAGGARCPSGMCCSNFGWCGNTQDYC-GPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLEC 287
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 2.619e-94 Identity = 161/266 (60.53%), Postives = 186/266 (69.92%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE SQAGGAVCP GLCCSKFGFCG+T YC LF+Q+LK+RND C G GFYTYDAFIAAA+SF F +K+E+AAFLAQTSHETTGGWPTAPDGPYAWGYCF EQ YC P + WPCAPGKKY+GRGPIQ+++NYNYG AG+AI DL+ NPD ++ +PT+SFKTA WFWMTPQ+ KPS HDVITG+W PSA+D+ AGR+PGYGV+TNIINGGIEC Sbjct: 23 AEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYC------GDGCQSQCKSSPTPTIPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP-KDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIEC 281
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 7.619e-94 Identity = 158/266 (59.40%), Postives = 181/266 (68.05%), Query Frame = 3 Query: 3 AEHRVSQAGGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 AE QAGGA+CP GLCCS+FG+CG+T AYC R F+ +LKHRND AC +GFYTYDAFI AAKSF F RK+EIAAF QTSHETTGGW TAPDGPY+WGYCFKQEQ +YC PS +WPCA GK Y+GRGP+Q+S+NYNYG G+AI DLL NPD V+NDP I+FK A WFWMTPQSPKPSCH VI GQW+PS +D AGR+PGYGV+TNIINGG+EC Sbjct: 20 AEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPGPTGDLSGIIS------------RSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLEC 273 The following BLAST results are available for this feature:
BLAST of CF838393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838393 ID=CF838393; Name=CF838393; organism=Citrus sinensis; type=EST; length=800bpback to top |