CF838393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.167e-56 Identity = 109/196 (55.61%), Postives = 128/196 (65.31%), Query Frame = 3 Query: 213 DLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 DLF ++LK+RND C GFYTYDAFIAAA SF F R++EIAAF QTSHETTGG +A P+ GYCF ++ +Y+GRGPIQ++ NY AG AI +L+ NPD VA D TISFKTA WFWMTPQ KPS HDVI G+W PSA+D A R+PGYGV+TNIINGGIEC Sbjct: 34 DLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ---------------SDRYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIEC 212
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.306e-56 Identity = 107/196 (54.59%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 216 LFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXR-KREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 +F +L +R+++ C +GFYTYDAFIAAA SF AF +RE+AAF QTSHETTGG + D + WGYCFK+E A Y+GRGPIQ++ NY AG A+ +DL+GNPD V+ D +SFKTA WFWMT Q KPSCHDVI G+W PSA+DT AGR+PGYGV+TNIINGGIEC Sbjct: 40 VFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSD-QFQWGYCFKEEINK-------------ATSPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIEC 221
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.076e-55 Identity = 109/196 (55.61%), Postives = 125/196 (63.78%), Query Frame = 3 Query: 213 DLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 DLF ++LK+RND C GFYTYDAFIAAA SF F R++EIAAF QTSHETTGG +A P+ GYCF ++ +Y+GRGPIQ++ NY AG AI DL+ NPD VA D TISFKTA WFWMTPQ KPS HDVI G W PSA+D A R PG GV+TNIINGGIEC Sbjct: 34 DLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ---------------SDRYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIEC 212
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.396e-55 Identity = 109/199 (54.77%), Postives = 129/199 (64.82%), Query Frame = 3 Query: 210 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINV--DLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 R+LFEQ+L RN+ AC KGFYTYDAFIAAA SF F RK+EIAAF QTSHET GG G + GYCF ++ +Y+GRGPIQ+++ NY AG+ I V DL+ NPD VA DP ISF+TA WFWMT Q KPSCH+VI GQW PS +DT A R+PGYGV+TNIINGG+EC Sbjct: 33 RELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ---------------SDRYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLEC 212
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.460e-54 Identity = 108/199 (54.27%), Postives = 126/199 (63.32%), Query Frame = 3 Query: 210 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINV--DLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 R+LFEQ+L RN+ AC KGFYTYDAFIAAA SF F RK+EIAAF QTSHET GG G + GYCF ++ +Y+GRGPIQ+++ NY AG+ I V +L+ NPD VA DP ISFKTA WFWMT Q KPSCH+VI GQW PS DT A R+PGYGV+TNIING EC Sbjct: 33 RELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQ---------------IEQSDRYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFEC 212
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 2.655e-46 Identity = 104/263 (39.54%), Postives = 136/263 (51.71%), Query Frame = 3 Query: 3 AEHRVSQA-GGAVCPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYC-FKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIIN 785 ++HR A G C CCS G+CG YC+ LF+Q+ HR D C +GFY+Y +F+ AA+SF AF RKRE+AAFLA S + T G + + P+AWG C D+C S WPCA GKKY RGPIQ+++N+NYG AG+AI DL+ NPD V DP ISFKTA WFWM+ KPSCHD++ +++ A R+P GV+ NII+ Sbjct: 68 SDHRCGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVT--EPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHIS-QATSGERSDVENPHAWGLCHINTTTVTENDFCT-SSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN------ANSAANRIPNKGVIGNIIS 318
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 9.774e-41 Identity = 96/256 (37.50%), Postives = 120/256 (46.88%), Query Frame = 3 Query: 39 CPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 C G CCS++G+CG T AYC + F +K++ C GK FYT +F+ AA+S+ F KREIAAF A +HET C+ E G DYC S +QWPC PGKKY+GRGP+QIS+N+NYGPAGK I D L +PD VA DPTISFKTA WFWM + H V++ G+G ING +EC Sbjct: 32 CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS---------------QGFGATIRAINGALEC 253
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.929e-38 Identity = 94/257 (36.58%), Postives = 117/257 (45.53%), Query Frame = 3 Query: 39 CPGGLCCSKFGFCGNTPAYC-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 C +CCSK+G+CG YC + F +K++ C GK FYT +F+ AA S+ F KREIAAF A +HET C+ E G DYC + +QWPC PGKKY+GRGP+QIS+NYNYGPAG+ I D L +PD VA DPTISFKTA WFWM + H V+ L G+G ING +EC Sbjct: 34 CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVM---------------LQGFGATIRAINGALEC 256
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.943e-37 Identity = 88/255 (34.51%), Postives = 115/255 (45.10%), Query Frame = 3 Query: 39 CPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQ-QWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 C +CCSKFG+CG T YC F +K++ + C+GK FYT AF++A K + F KREIAAF A +HET +C+ E YC P++ QWPCA G+KY+GRGP+QIS+NYNYGPAG+AI D LG+P VA D ++FK A WFWM S H V+ G+G T + +EC Sbjct: 25 CQPNVCCSKFGYCGTTDEYC--------GDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVP---------------QGFGATTRAMQRALEC 237
BLAST of CF838393 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.843e-37 Identity = 89/255 (34.90%), Postives = 116/255 (45.49%), Query Frame = 3 Query: 39 CPGGLCCSKFGFCGNTPAYCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFXXXXXXXXRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIEC 800 C CCSKFG+CG T AYC D F +K++ + C+GK FYT AF++A ++ F KREIAAF A +HET +C+ E YC S +QWPCA G+KY+GRGP+QIS+NYNYGPAG+ I + L +P+ VA D I+FKTA WFWM + H V+ G+G ING +EC Sbjct: 30 CQPNFCCSKFGYCGTTDAYC--GDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN------NVHGVMP---------------QGFGATIRAINGALEC 248 The following BLAST results are available for this feature:
BLAST of CF838393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838393 ID=CF838393; Name=CF838393; organism=Citrus sinensis; type=EST; length=800bpback to top |