CF838395

Overview
NameCF838395
Unique NameCF838395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.912e-66
Identity = 125/206 (60.68%), Postives = 150/206 (72.82%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S S AQL+P FY+ TCP   +I    + NA  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF+V+D MKAA+E ACP  VSCAD+LAIA+++SV L+GGPSW VP GRRD       LA+ NLP PF TL+ L+ RF NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ TG PDPTL+
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLD 220          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.691e-65
Identity = 123/206 (59.71%), Postives = 150/206 (72.82%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S S AQL+P FY+ TCP   +I+   + NA  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF+V+D MKAA+E ACP  VSCAD+LAIA+++S+ L+GGPSW VP GRRD       LA+ NLP P  TL  L+ RF NVGL+ ++DLVALSG HTFG++QCQF   RL+NF  TG PDPTL+
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLD 220          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.208e-65
Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            S+S AQL PDFY  TCP   NII   + N   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NS RGF+V+D MKAA+E ACP  VSCADI+ IAS+ SV LSGGP W VPLGRRD   A  +LA+  LP+PF TL  L+  F +VGLN  +DLVALSG HTFG+AQCQF + RL+NFNGT  PDP+LN T
Sbjct:   25 SNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPT 229          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.919e-65
Identity = 129/208 (62.02%), Postives = 150/208 (72.12%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            S+S AQL PDFY  TCP   +II  ++ +   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NSARGF V+D MK ALE ACPG VSCADIL IAS+ SV LSGGP W VPLGRRD   A  +LA+  LP+PF  L  L+  F +VGLN  +DLVALSG HTFGRAQCQF + RL+NFNGT +PDP+LN T
Sbjct:   25 SNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPT 229          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.431e-64
Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            S+S AQL PDFY  TCP+  NII  ++ +   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NSARGF V+D MK +LE ACP  VSCAD+L IAS+ SV LSGGP W VPLGRRD   A   LA+  LP+PF TL  L+  F +VGLN  +DLVALSG HTFGRAQCQF + RL+NFNGT  PDPTL+ T
Sbjct:   25 SNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPT 229          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.439e-64
Identity = 120/206 (58.25%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S S AQL+P FY+ TCP   +I    ++ A  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N  SARGF+V+D MKAA+E ACP  VSCAD+LAIA+++SV L+GGPSW VP GRRD       LA+ NLP P  TL +L+ +F NVGL+  +DLVALSG HTFG+ QCQF   RL+NF+ +G PDPTL+
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLD 222          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.525e-63
Identity = 121/208 (58.17%), Postives = 152/208 (73.08%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            S+ +AQL+PD Y  +CPN   I+   ++ A  ++IR+ ASLIRLHFHDCFVNGCD S+LLD        +SEK ++ N NS RGFEV+D +KAA+E+ACPG+VSCADIL +A+  SV LSGGP W V LGR+DG  AN+S A+ NLP+PF+ LD +  +F  VGLN  TD+VALSGAHTFG+A+C  FS RLFNF G G PD TL  T
Sbjct:   24 SAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT------NSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSAN-NLPSPFEPLDAIIAKFAAVGLN-VTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETT 223          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.026e-62
Identity = 121/207 (58.45%), Postives = 152/207 (73.43%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            +S AQL+  FY+TTCPN ++I+ GV+     +D R  A +IRLHFHDCFVNGCDGSILLD     T  D+       N  A GF++VD +K ALE+ CPG+VSCADILA+ASE  V L+ GPSW V  GR+D  TANRS A+ ++P+PF+TL ++  +FTN G+ D TDLVALSGAHTFGRA+C  F QRLFNFNG+GNPD T++AT
Sbjct:   19 ASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPA-----NVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDAT 219          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.026e-62
Identity = 124/201 (61.69%), Postives = 143/201 (71.14%), Query Frame = 3
Query:  126 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            QL PDFY+ TCP+  NII  V+ +   +D RI AS++RLHFHDCFV GCD SILLD      S  +EK +  N NSARGF V+D MK ALE ACP  VSCADIL IAS+ SV LSGGPSW VPLGRRD   A   LA+  LP+PF TL  L+  F +VGLN  +DLVALSG HTFGRA+C F + RL+NFNGT  PDPTLN
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDT---SKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLN 198          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.285e-62
Identity = 121/208 (58.17%), Postives = 151/208 (72.60%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            S  +AQL+PD Y  +CPN   I+   +  A  ++IR+ ASLIRLHFHDCFVNGCD S+LLD        DSEK ++ N NSARGFEV+D +KAA+E+ACPG+VSCADIL +A+  SV LSGGP W V LGR+DG  AN++ A+ NLP+PF+ LD +  +F  V LN  TD+VALSGAHTFG+A+C  FS RLFNF G GNPD TL  +
Sbjct:   24 SGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA------DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLN-ITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETS 223          
The following BLAST results are available for this feature:
BLAST of CF838395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER37_ARATH9.912e-6660.68Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER38_ARATH1.691e-6559.71Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER23_ARATH2.208e-6561.54Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER22_ARATH4.919e-6562.02Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER3_ARMRU1.431e-6461.54Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER2_ARMRU5.439e-6458.25Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PERN_ARMRU3.525e-6358.17Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PERX_TOBAC1.026e-6258.45Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PERE5_ARMRU1.026e-6261.69Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER59_ARATH2.285e-6258.17Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838395 ID=CF838395; Name=CF838395; organism=Citrus sinensis; type=EST; length=735bp
TGCAAGAGTACCCCTTAAAGACCACTCACTAATTTCTCTTCAGAAGGAAA
ATGCCCCTTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGT
GCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACA
CCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCT
TTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCA
TGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTG
CCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAAT
TCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAG
TGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTG
AACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGA
AGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCC
AACACCATTTCAGACTCTTGATTTGCTCCAAGGCAGATTTACAAATGTCG
GTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTT
GGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTCAATGG
AACTGGCAATCCAGACCCAACGCTGAACGCAACTC
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