CF838395

Overview
NameCF838395
Unique NameCF838395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.184e-48
Identity = 103/194 (53.09%), Postives = 128/194 (65.98%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFN 692
            S++ AQL+  FY+T+CPNA + I   +  A NS+ R+ ASL+RLHFHDCFV GCD S+LL           E+ +  N  S RGF VVD +K  +E+ C   VSCADILA+A+  SV   GGPSWTV LGRRD  TAN S A+ +LP P  +L  L G F+  GL D TD+VALSGAHT G+AQCQ F  RL+N
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--------QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYN 203          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.184e-48
Identity = 103/194 (53.09%), Postives = 128/194 (65.98%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFN 692
            S++ AQL+  FY+T+CPNA + I   +  A NS+ R+ ASL+RLHFHDCFV GCD S+LL           E+ +  N  S RGF VVD +K  +E+ C   VSCADILA+A+  SV   GGPSWTV LGRRD  TAN S A+ +LP P  +L  L G F+  GL D TD+VALSGAHT G+AQCQ F  RL+N
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--------QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYN 203          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.217e-47
Identity = 95/193 (49.22%), Postives = 133/193 (68.91%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFN 692
            SS AQL+ +FY+ TCP   + +   +Q+A + + R+ ASL+RL FHDCFVNGCD S+LLD+ ++ T    E+ ++ N NS RG  V+D +K+ +ES CPG+VSCADI+AIA+  SV + GGP W V LGRRD +TA+ S A+ N+P P  +L  L  +F   GL+   D+VALSGAHT G+A+C  F  R++N
Sbjct:   22 SSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTG---EQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLS-TRDMVALSGAHTIGQARCTSFRARIYN 210          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.590e-47
Identity = 95/196 (48.47%), Postives = 130/196 (66.33%), Query Frame = 3
Query:  141 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            +Y+T+CP A +I+   +++ F+SD  I+  L+RLHFHDCFV GCDGS+L+          S + +   N   RG EV+D  KA LE+ CPG+VSCADILA+A+  SV+LS GPSW VP GR+DGR +  + A  NLP+P  ++ + + +F + GL D  DLV L GAHT G+  C FF  RL+NF  TGN DPT++
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKG-------KSAEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEA-SNLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTIS 219          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.076e-47
Identity = 92/197 (46.70%), Postives = 123/197 (62.44%), Query Frame = 3
Query:  138 DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            D+Y + CP A  I+ GV     +    + A L+R+HFHDCFV GCDGS+LL +  ND   D+       N + +G+EVVDA K ALE  CP ++SCAD+LA+ +  +V + GGP W VPLGRRDGR +  + A  NLP+PF  +  L+  F N GLN   DLV LSG HT G + C   + RL+NF G G+ DP++N
Sbjct:   29 DYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDA-----VPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMN 219          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.542e-47
Identity = 96/206 (46.60%), Postives = 131/206 (63.59%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNA 731
            SS+AQL  +FY  +CPNA  II   +QN  ++   + A LIR+HFHDCFV GCDGS+L+++ + +   D+       N + RGF  V+ +KA LE  CP  VSCADI+A+ +  +V  +GGPSW+VP GRRDGR +N++ A  N+P P      LQ  F N GLN   DLV LSGAHT G + C   + RL+NF+ T   DP+L++
Sbjct:   24 SSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPP-----NLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLN-LKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDS 223          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.758e-46
Identity = 102/195 (52.31%), Postives = 128/195 (65.64%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQN-LPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFN 692
            S +QAQL  DFY+ +CP+    +  V+Q     + RI ASL+RL FHDCFVNGCD SILLD+     S   EK +  NNNS RG+EV+DA+K+ +E  CPG+VSCADILAI +  SV L GG  W+V LGRRD  TA+ S A+   LP P  TLD L   F   GL+   D+VALSGAHT G+A+C  F  R++N
Sbjct:   24 SQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTR---SFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYN 214          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.916e-46
Identity = 92/198 (46.46%), Postives = 132/198 (66.67%), Query Frame = 3
Query:  141 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            FY++TCP A +I+   ++  F SD  +   ++R+HFHDCFV GCDGSIL++        D+E+ ++ N N  +GF+V++  K  +E+ CPG+VSCADILA+A+  SV  + G +W+VP GRRDGR  +R+    +LP  F ++D+ + +F   GLN   DLVAL+GAHT G A C     RLFNFN TG PDP+++AT
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS------DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGR-VSRAADAGDLPAFFDSVDIQKRKFLTKGLN-TQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDAT 224          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.680e-46
Identity = 94/190 (49.47%), Postives = 125/190 (65.79%), Query Frame = 3
Query:  144 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP 713
            Y  +CP A +I+   ++     D R+ ASL+RLHFHDCFVNGCD S+LLD+      +  EK +  N NS RGFEV+D++K+ +ES CP  VSCADILA+A+  SV +SGGP W V +GR+D RTA++  A   LP+P  T+  L   F N+GL+  TD+VALSG HT G+A+C  F+ RL     TG P
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEG---LVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPLQ-TGQP 239          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.724e-46
Identity = 97/194 (50.00%), Postives = 129/194 (66.49%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 689
            S  QAQL+P FY+ +C NA + I   ++ A   + R+ ASLIR+HFHDCFV+GCD SILL+  +   +I+SE+ ++ N  S RGFEV+D  K+ +E  CPGIVSCADI+A+A+  +    GGP W V +GRRD   A ++LA+   LP    TLD L G F+  GLN   DLVALSGAHT G++QC  F  RL+
Sbjct:   20 SICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTS---TIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLN-TRDLVALSGAHTIGQSQCFLFRDRLY 209          
The following BLAST results are available for this feature:
BLAST of CF838395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_ORYSJ4.184e-4853.09Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI4.184e-4853.09Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER4_VITVI1.217e-4749.22Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER25_ARATH1.590e-4748.47Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1_ARATH2.076e-4746.70Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER30_ARATH3.542e-4746.60Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER68_ARATH1.758e-4652.31Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PERN1_TOBAC3.916e-4646.46Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER40_ARATH6.680e-4649.47Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER5_ARATH8.724e-4650.00Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838395 ID=CF838395; Name=CF838395; organism=Citrus sinensis; type=EST; length=735bp
TGCAAGAGTACCCCTTAAAGACCACTCACTAATTTCTCTTCAGAAGGAAA
ATGCCCCTTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGT
GCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACA
CCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCT
TTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCA
TGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTG
CCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAAT
TCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAG
TGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTG
AACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGA
AGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCC
AACACCATTTCAGACTCTTGATTTGCTCCAAGGCAGATTTACAAATGTCG
GTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTT
GGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTCAATGG
AACTGGCAATCCAGACCCAACGCTGAACGCAACTC
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