CF838395

Overview
NameCF838395
Unique NameCF838395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39
Identity = 90/196 (45.92%), Postives = 115/196 (58.67%), Query Frame = 3
Query:  141 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            FY   C N  +I+  V+Q+   S       ++R+HFHDCFV+GCDGS+LL   A +TS    + +   N S RGFEV++  KA LE ACP  VSCADIL +A+  +V L+GG  W VPLGR DGR +  S  D NLP P  ++   +  F    LN   DLV L G HT G A C     R  NFNGTG PDP+++
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTS----ERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSID 226          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 3
Query:  117 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGNPD 716
            S AQL   FY+ TCP+A +I+  V+Q A  +D    A L+RL FHDCFV GCDGSIL+ +  N    D E+F+ A N    GF+V+D  K+ LE  CPG+VSCADI+A+A+  ++  + GP + VP GRRDG  AN   A +NLP    +++ L+ +F   GL+D  DLV LS GAHT G   C F   RL   + T NP+
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN----DDERFA-AGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRLDAQDPTINPE 213          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 90/207 (43.48%), Postives = 119/207 (57.49%), Query Frame = 3
Query:  117 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSA-RGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S AQL  DFY  TCPN   I+   +Q           + +RL+FHDCFVNGCD S++   +A+  +  +EK    N + A  GF+ V   K A+++   C   VSCADIL +A+   VNL+GGP + V LGRRDG +++ S     LP P   L+ L   F   GL+ N D++ALSGAHT G A C     RL+NFN T N DPT+N
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVM---IASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTIN 225          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 85/191 (44.50%), Postives = 113/191 (59.16%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 686
            S+ AQL   FY+ +CP A +I+  V+ N F SD  ITA+ +R+ FHDCFV GCD S+L+D      S   EK S   N S RG+E++D  K  LE+ACP  VSCADI+ +A+  SV L+GGP ++VP GRRDG  +N +  D NLP P   +      F   G+N N  +  + G H+ G A C  F  RL
Sbjct:   17 SALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPS---EK-STGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37
Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 3
Query:  120 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLS-GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            + +L  +FY+ +CP A +I+  ++     ++  +   L+R+H+HDCFV GCD S+LLD+VA     + E      N S  GFE++D +K  LE  CP  VSCADIL +A+  +V+     P W V  GR DGR +  + A ++LP+       LQ  F    L D  DLVALSGAHT G A C  F +RL NF G G+ DP+LN
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKE---ARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLN 242          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 89/204 (43.63%), Postives = 122/204 (59.80%), Query Frame = 3
Query:  117 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S+A L   +Y+ +CP A  IIL  ++NA   D ++ A L+R+ FHDCF+ GCD SILLD+  ++    +EK    N  S R F V++  K  LE ACP  VSCAD++AIA+   V LSGGP W+V  GR+DG T +R+   +NLP P   +  L   F   GL+   D+V LSG HT G + C  F  RL NF+   + DP++N
Sbjct:   22 SEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSN---QAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMN 219          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 89/202 (44.06%), Postives = 118/202 (58.42%), Query Frame = 3
Query:  129 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMAN-NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            L+ +FY   CP   NII   L+  F  DI + A+++R+HFHDCFV GC+ S+LL   A   S   E+ S+ N     + F V++ ++A ++  C  +VSC+DILA+A+  SV LSGGP + VPLGRRD    A++     NLP PF     L   F N  LN  TDLVALSG HT G A C  F+ RL+      N DPT+N
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL---AGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLY-----PNQDPTMN 236          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 83/195 (42.56%), Postives = 118/195 (60.51%), Query Frame = 3
Query:  141 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTL 725
            +Y + C N  +I+  V+++ + ++      ++R+HFHDCFV GCD S+LL         +SE+ ++ N  S RGF V++  K  LE ACP  VSCADILA+A+   V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + + RF    LN   DLV L+  HT G A C  F  R FN++ TG+PDPT+
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL------AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLN-TQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTI 222          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 86/208 (41.35%), Postives = 120/208 (57.69%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S   AQL   FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SI++ + +     D    S+A +    GF+ V   K A++S   C   VSCADILA+A+ + V L+GGPS+ V LGRRDGR + ++     LP P   L+ L G F+  GL+  TD++ALSGAHT G A C   S+R++NF+ T   DP++N
Sbjct:   21 SCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDHPDD--MSLAGD----GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSIN 221          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 90/208 (43.27%), Postives = 119/208 (57.21%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            SS  AQL  +FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SILL + +     D +  S+A +    GF+ V   K AL+    C   VSCADILA+A+   V L+GGP++ V LGRRDGR +  +    +LP P   LD L   F   GL+  TD++ALSGAHT G A C  FS+R++NF+     DPTLN
Sbjct:   19 SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDK--SLAGD----GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLN 219          
The following BLAST results are available for this feature:
BLAST of CF838395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER69_ARATH3.550e-3945.92Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER13_ARATH2.301e-3846.27Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER51_ARATH3.005e-3843.48Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER44_ARATH8.744e-3844.50Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER24_ARATH1.142e-3741.67Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER66_ARATH1.948e-3743.63Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER12_ARATH5.668e-3744.06Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER70_ARATH7.402e-3742.56Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER45_ARATH1.649e-3641.35Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER16_ARATH2.154e-3643.27Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838395 ID=CF838395; Name=CF838395; organism=Citrus sinensis; type=EST; length=735bp
TGCAAGAGTACCCCTTAAAGACCACTCACTAATTTCTCTTCAGAAGGAAA
ATGCCCCTTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGT
GCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACA
CCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCT
TTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCA
TGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTG
CCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAAT
TCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAG
TGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTG
AACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGA
AGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCC
AACACCATTTCAGACTCTTGATTTGCTCCAAGGCAGATTTACAAATGTCG
GTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTT
GGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTCAATGG
AACTGGCAATCCAGACCCAACGCTGAACGCAACTC
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