CF838395

Overview
NameCF838395
Unique NameCF838395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 3
Query:  153 TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            TC +A   I   ++  + +D  I   L+RL + DC VNGCDGSILL         +SE+ +   N    GF ++D +K  LES CPG+VSCADIL +A+  +V+++G PS+ V  GRRDG T N    D  LP+P  ++D     F + GL D  D+  L GAH+ G+  C +   RL+NF  TG PDPT+N T
Sbjct:   45 TCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP------NSER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTT 228          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.798e-36
Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 3
Query:  117 SQAQLTPDFYNT--TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S  +LT  +Y    TC NA N +   ++  + +D  I   L+RL + DCFV+GCD S+LL+        +SEK +   N    GF ++D +K  LE  CPG+VSCADIL +A+  +V+L+G PS+ V  GRRDG T+++   D  LP+P  + D     F + GLN   D+  L G+H+ GR  C +   RL+N+N TG P PT+N
Sbjct:   31 SMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGP------NSEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMN 226          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = 3
Query:  126 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGG--PSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            QL   FY+  C N  NI+  V+  AF  D  I  ++IRL+FHDCF NGCD S+LLD        +SEK   + N S RG+EV+D +K+A+E  C  +VSCADI+A+A+   V L+ G    + +P GR DG+ ++  L D  LP+P  T+     +F    L+ N D+V L G HT G   C F   RL+NF  T  PDP+++
Sbjct:   27 QLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLD------GSNSEK-KASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLN-DMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMD 219          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.396e-35
Identity = 83/207 (40.10%), Postives = 119/207 (57.49%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSE-KFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            + S AQL+ ++Y +TCP+   I+   +   F   +    + +R+ FHDCFV GCD S+ + +   D   D++   S+A +    GF+ V   K A+ES CPG+VSCADILA+A+   V L GGP + V LGRRDG  +  S     LP P   +  L   F + GL+  TD++ALSGAHT G + C  F+ RL NF+     DPT++
Sbjct:   26 AESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGD----GFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMD 227          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 3
Query:  129 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNAT 734
            L+  +Y  +CP A  I+   + NA  +D  + A LIR+ FHDCF+ GCD SILLD+  ++T+   EK S AN  S RG+E++D  K  +E+ CPG+VSCADI+A+A+  +V  +GGP + +P GR DG+  ++    +NLP+PF     L   F   G     D+VALSGAHT G A+C  F  RL        PD +L++T
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTA---EKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDST 215          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 83/209 (39.71%), Postives = 115/209 (55.02%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDS--EKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            ++ AQL+  FY+ TCPN   I+   +Q           + +RL FHDCFVNGCD S+++ +   + +     +  S+A +    GF+VV   K AL+S  +C   VSCADIL +A+   V  +GGPS+ V LGR DG  +  S  + NLP P   +D L   FT   L    D++ALS AHT G A C    +R+  FNG  + DPTLN
Sbjct:   22 TTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGD----GFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLN 225          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.491e-34
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 3
Query:  117 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTS--IDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            S AQL  +FY  +CPN   I+   +Q           + +RL+FHDCFVNGCD S+++ +  N+ +     E  S+A +    GF+ V   K AL++   C   VSCADIL +A+   VNL+GGP + V LGR DG ++  +     LP P   ++ L   F   GL+ N D++ALSGAHT G A C     R++ FN T   DPT+N
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGD----GFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVN 225          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.491e-34
Identity = 76/201 (37.81%), Postives = 110/201 (54.73%), Query Frame = 3
Query:  126 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            +L+ D+Y+  CP    ++  V    F        + IRL FHDCFV GCDGSIL++       +   +          GF+ +   KA +ES CP +VSC+DILAIA+   ++L+GGP + V  GR DG+ +       N+P    T+D L   F + GL    +LV LSG+HT G A C+ F  RL+++ GT  PDP+L+
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLD 240          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.865e-34
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 3
Query:  111 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGN 710
            SSS A+L+ +FY  +CP A  I+   +++A +SD  +   L+RL FHDCFV GCDGS+L+     + S          N S  GF V++++K  LE  CPG VSCADIL +A+  +V   GGP   +P GRRDGR +  +    N+     T+D +   F++ GL+ + DLV LSGAHT G A C  F+ R F  +  GN
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPG-------NASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSR-FKLDPKGN 215          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.707e-33
Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 3
Query:  177 ILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQC 665
            + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  NNNS RGFEV+   K ++  +CP I VSCADILAIA+  S+   GG ++TV LGR D  TAN S A   LP P   L +   +F++       ++VAL+GAHT G A+C
Sbjct:   85 VKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARC 245          
The following BLAST results are available for this feature:
BLAST of CF838395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER61_ARATH3.674e-3642.27Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER26_ARATH4.798e-3640.29Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER60_ARATH6.266e-3641.87Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER55_ARATH1.396e-3540.10Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER47_ARATH1.823e-3542.57Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER35_ARATH1.543e-3439.71Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER50_ARATH4.491e-3439.42Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER19_ARATH4.491e-3437.81Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER18_ARATH5.865e-3441.50Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER2_SOLLC1.707e-3348.17Suberization-associated anionic peroxidase 2 OS=So... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838395 ID=CF838395; Name=CF838395; organism=Citrus sinensis; type=EST; length=735bp
TGCAAGAGTACCCCTTAAAGACCACTCACTAATTTCTCTTCAGAAGGAAA
ATGCCCCTTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGT
GCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACA
CCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCT
TTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCA
TGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTG
CCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAAT
TCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAG
TGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTG
AACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGA
AGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCC
AACACCATTTCAGACTCTTGATTTGCTCCAAGGCAGATTTACAAATGTCG
GTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTT
GGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTCAATGG
AACTGGCAATCCAGACCCAACGCTGAACGCAACTC
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