CF838395

Overview
NameCF838395
Unique NameCF838395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33
Identity = 83/181 (45.86%), Postives = 116/181 (64.09%), Query Frame = 3
Query:  126 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQC 665
            QLTP+     C    + +  V+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++ + CP + VSCADILAIA+  SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT G A+C
Sbjct:   75 QLTPE----AC--VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFT-LREMVALAGAHTVGFARC 246          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  126 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQC 665
            QLTP+     C    + + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++   CP I VSCADILAIA+  SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT G A+C
Sbjct:   74 QLTPE----AC--VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFT-LREMVALAGAHTVGFARC 245          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTG-NP 713
            ++++ LT DFY+ +CP   +II   + N   S     A+ +RL FHDCF NGCD S+L+ + A +T+      +++      GF+VV   K ALE ACP  VSC+DI+A+A    +   GGP + + LGRRD RT+  SL    LP P   +  L  +F++ G +   ++VALSGAHT G + C+ F+ R+   N TG NP
Sbjct:   27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGD--GFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNP 224          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33
Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  123 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 686
            AQL   FY  TCP A +I+  V+ N ++ +  +TA+L+R+ FHDC V GCD S+L+D     T   SEK S+  N   RGFE++D  K  LE  CP  VSCADI+ IA+  S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT G A C  F  R+
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPT---TERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI 201          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.464e-32
Identity = 79/199 (39.70%), Postives = 115/199 (57.79%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGN 710
            +S A L+ +FY ++C  A  ++   +++A +SD  I   L+RL FHDCFV GCD S+L+         +S + S   N S  GF V+D  K A+E+ CP  VSCADI+A+A+  +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT G + C  F+ R F  +  GN
Sbjct:   24 TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQG-------NSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGR-FQRDSKGN 213          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32
Identity = 87/196 (44.39%), Postives = 115/196 (58.67%), Query Frame = 3
Query:  108 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIAS-EQSVNLSGGP-SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQC-QFFSQRL 686
            ++S    L   +Y  TCP A  I+   ++ A   +    A++IR+ FHDCFV GCD S+LLD      S   EK +  NN S RGFE++DA+K ALE+ACPG+VSCADI+A A+ + S  LS G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT GR+ C  F S RL
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD--PTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMS-LEDLVVLSGAHTVGRSHCSSFVSDRL 220          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32
Identity = 76/201 (37.81%), Postives = 114/201 (56.72%), Query Frame = 3
Query:  129 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNA 731
            L+ ++Y+  CP+   I++  ++    SD  +  +L+RL FHDC V GCD S+LLD    +    + K       + RGFE++D +K+ +E +CPG VSCADIL  AS  +    GGP W    GRRD + +     ++ +P+  + +  L   F + GLN   DLV LSGAHT G+A C     RL+N+N T   DP+++A
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASK-------TLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDA 242          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31
Identity = 76/200 (38.00%), Postives = 116/200 (58.00%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP 713
            ++Q++LT +FY+ TCP   +II   + N   ++    A++IRL FHDCF NGCD S+L+ + A +T+      +++      GF+V+   K ALE ACP  VSC+DI+++A+   +   GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+ G + C+ F  R+   N   NP
Sbjct:   16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGD--GFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRVGRNNTGYNP 212          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  186 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQC 665
            ++  A  ++ R+ ASLIRLHFHDCFV+GCDG ILL++ AN T    E+ + AN+NS RGF V+D  K   ++ C    VSCAD+LAIA+  +       ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT G ++C
Sbjct:   79 IVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFT---GEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC 235          
BLAST of CF838395 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.725e-31
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 3
Query:  114 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNV-ANDTSID-SEKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLQGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLN 728
            ++ AQL  +FY  +CPN   I+  V+Q           + +RL FHDCFVNGCD S+++ +   N    D  +  S+A +    GF+VV   K AL++  +C   VSCADILA+A+   V  + GPS+ V LGR DG  +  +  + NLP P   +  L   F    L    D++ALS AHT G A C     R++NFN T   DPTLN
Sbjct:   22 TTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGD----GFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLN 225          
The following BLAST results are available for this feature:
BLAST of CF838395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_SOLLC2.229e-3345.86Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU2.911e-3346.41Suberization-associated anionic peroxidase OS=Sola... [more]
PER63_ARATH2.911e-3339.80Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER8_ARATH3.802e-3342.02Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER46_ARATH2.464e-3239.70Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER2_MAIZE3.218e-3244.39Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER7_ARATH7.170e-3237.81Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER31_ARATH1.597e-3138.00Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PERN_IPOBA2.086e-3144.10Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER73_ARATH2.725e-3139.23Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838395 ID=CF838395; Name=CF838395; organism=Citrus sinensis; type=EST; length=735bp
TGCAAGAGTACCCCTTAAAGACCACTCACTAATTTCTCTTCAGAAGGAAA
ATGCCCCTTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCGTTTGT
GCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTACAACA
CCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGAATGCT
TTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCATTTTCA
TGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAACGTTG
CCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATAATAAT
TCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAG
TGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGCTTCTG
AACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCACTGGGA
AGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAATCTTCC
AACACCATTTCAGACTCTTGATTTGCTCCAAGGCAGATTTACAAATGTCG
GTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACACTTTT
GGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTCAATGG
AACTGGCAATCCAGACCCAACGCTGAACGCAACTC
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