CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.964e-34 Identity = 66/93 (70.97%), Postives = 75/93 (80.65%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PAGKEHG PED+ RHA +F+++D+QIPL+GPNSI+GRAVVVHADPDDLGKGGHELSKTTGNAGGRVACG+IGLQG Sbjct: 60 GPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.177e-34 Identity = 69/93 (74.19%), Postives = 73/93 (78.49%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PAGKEHG P+DE RHA TA FT+VD QIPL+GP+SIIGRAVVVHADPDDLGKGGHELSKTTGN GGRVACGI GLQG Sbjct: 60 GPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKTTGNTGGRVACGINGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 5.177e-34 Identity = 69/93 (74.19%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PA KEHG PEDENRHA A V D+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 60 GPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 5.177e-34 Identity = 69/93 (74.19%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PA KEHG PEDENRHA A V D+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 60 GPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 5.177e-34 Identity = 68/93 (73.12%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GK HG PED NRHA TATFT+ D+QIPL GPNSI+GRAVVVHA+PDDLGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 8.831e-34 Identity = 67/93 (72.04%), Postives = 73/93 (78.49%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PAGKEHG P D+NRHA TA+FT+ D QIPL+G NS+IGRAVVVH DPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.153e-33 Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PAG EHG PEDE RHA T +VD+QIPLSG NSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 1.153e-33 Identity = 69/93 (74.19%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GK+HG PED NRHA TATFT+ D QIPLSGPNSI+GRAVVVHADPD LGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.967e-33 Identity = 68/93 (73.12%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GK HG PED NRHA TATFT+ D QIPL+GPNSI+GRAVVVHADPDDLGKGGHELS TGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 3.356e-33 Identity = 68/93 (73.12%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GK+HG P+DE+RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 61 GPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 153 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |