CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.476e-33 Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GKEHG P D+NRHA T F++ D+QIPLSGP+SI+GRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG++GLQG Sbjct: 62 GPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQG 154
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32 Identity = 67/93 (72.04%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH PA KEHG PEDE RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG IGLQG Sbjct: 60 GPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGFIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32 Identity = 67/93 (72.04%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GKEHG P+DENRHA A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 60 GPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32 Identity = 65/93 (69.89%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GKEHG PEDE+RHA + D+QIPL+GP+SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVACGIIGLQG Sbjct: 59 GPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32 Identity = 65/92 (70.65%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 278 GPH PAGKEHG PED NRHA T FTV D+QIPL+G NS++GRAVVVHAD DDLGKGGHELSKTTGNAGGR+ACG+IGLQ Sbjct: 60 GPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKGGHELSKTTGNAGGRLACGVIGLQ 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32 Identity = 66/93 (70.97%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 G H P EHG PEDENRHA T +F++ D+QIPL+GPNSIIGRAVVVHAD DDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 60 GAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.107e-27 Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P G HG PEDENRHA A T+VDNQIPL+GPN+++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 127 GPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGL 217
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.594e-27 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K HG PEDE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 129 GPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGL 219
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.783e-26 Identity = 57/91 (62.64%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P G HG P DE RHA A T+VDNQIPLSGPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 126 GPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 216
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.783e-26 Identity = 57/91 (62.64%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P HG PEDE RHA A T+VDNQIPL+GPNS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG+IGL Sbjct: 123 GPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |