CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.777e-26 Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P HG PEDE RHA A T+VDNQIPL+GPNS+IGRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 109 GPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.851e-26 Identity = 55/91 (60.44%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 52 GPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 142
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.851e-26 Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P HG PEDE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 109 GPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.510e-25 Identity = 54/91 (59.34%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P KEHG P DENRH + D++I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 60 GPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.972e-25 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P G HG PED+ RHA A T+VD QIPLSGPN++IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 119 GAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 209
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.972e-25 Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P HG PEDE RHA A T+VD QIPLSGPNS++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 118 GPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 208
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.363e-25 Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 281 GPH P GKEHG P+DENRHA A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSKTTGN+ + G+QG Sbjct: 26 GPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNSNSSMDSCAHGIQG 118
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.737e-25 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P HG PED+ RHA A T+VDNQIPLSGP+S+IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 48 GSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 138
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.493e-25 Identity = 57/92 (61.96%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 278 GPH P K+HG P D RHA A +V D QIPLSG +SI+GRAVVVHAD DDLG+ GHELSKTTGNAG RV CGIIGLQ Sbjct: 62 GPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTGHELSKTTGNAGARVRCGIIGLQ 153
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25 Identity = 54/91 (59.34%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P KEHG P DENRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |