CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.278e-24 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P KEHG P DENRH + D++I L G NSI+GR VVVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVHADPDDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.180e-24 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P KEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 59 GPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGCGVIGI 149
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.180e-24 Identity = 54/91 (59.34%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P HG P DE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 124 GAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 214
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROYA (Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba GN=Sod PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.847e-24 Identity = 52/91 (57.14%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROOR (Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.847e-24 Identity = 52/91 (57.14%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSRITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.847e-24 Identity = 52/91 (57.14%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 8.284e-24 Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROSI (Superoxide dismutase [Cu-Zn] OS=Drosophila simulans GN=Sod PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.082e-23 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROSE (Superoxide dismutase [Cu-Zn] OS=Drosophila sechellia GN=Sod PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.082e-23 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROME (Superoxide dismutase [Cu-Zn] OS=Drosophila melanogaster GN=Sod PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.082e-23 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |