CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_DROMA (Superoxide dismutase [Cu-Zn] OS=Drosophila mauritiana GN=Sod PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.082e-23 Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG P DENRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 4.112e-23 Identity = 50/91 (54.95%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P G HG P D NRH + D I L G NSI+GR +VVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 60 GPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22 Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P ++HG P RH T ++ D+QI L GPNSIIGR +VVHADPDDLG GGHELSKTTGNAGGR+ACG+IGL Sbjct: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22 Identity = 52/91 (57.14%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P HG P D RHA A T+VD+QIPLSG NS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 123 GSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 213
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 2.947e-21 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K+HG P+DE RH A ++ D+ I LSG NSIIGR +VVH PDDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 61 GPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLACGVIGI 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.848e-21 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P +EHG PED RH A + D I L+G +SIIGR +V+H + DDLG+GGHELSK TGNAGGR+ACG+IGL Sbjct: 60 GAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGL 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 5.026e-21 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P ++HG PEDE RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 62 GPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.564e-21 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P + HG PED+ RH AT + D I L+G +SIIGRAVVVHA DDLGKGGHE SKTTG+AGGR++CG+IG+ Sbjct: 59 GGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIGI 149
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K+HG P+DE RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAGGR+ACG+IG+ Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLACGVIGI 150
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 2.494e-20 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K+HG P+DE RH A +VD+ I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 60 GPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |