CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P ++HG P+DE RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 63 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG P DE RH A +V D + L GP+S+IGR VV+HA DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG PEDENRH A + D I L G S++GR +V+HA DDLG+ H SK TGNAG R ACG+IG+ Sbjct: 62 GPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPFL (Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus GN=sodC PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GKEHG PEDENRH A + D I L G S++GR +V+HA DDLG+ H SK TGNAG R ACG+IG+ Sbjct: 61 GPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 1.048e-18 Identity = 44/91 (48.35%), Postives = 51/91 (56.04%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG P D RH A+ + D + L GP SIIGR +VVHA DD GKGG+ S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKSLSLFGPYSIIGRTIVVHAGTDDFGKGGNAESLKTGNAGARAACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 275 GPH P K HG P DE RH TA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAGGRVACGI+ + Sbjct: 104 GPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIVAI 197
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18 Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K+HG P+DE RH A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+ACG+IG+ Sbjct: 61 GPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18 Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG P D RH A +V D+ + L GP+S++GR VVVH DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSHVKLIGPHSVVGRTVVVHGGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |