CF838444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG PED RH A + D I L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 62 GPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQDKLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG DENRH + ++ D I L GP+S+IGR VV+HA DDLGKGG++ S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKGGNDESLKTGNAGPRPACGVIGV 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18 Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P K HG PEDE RH + ++ D I L GP SI+GR VVVHA DDLGKGG S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPNG (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger GN=sodC PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG PED+ RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 62 GPHFNPYGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASPNC (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sodC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P GK HG PED+ RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 62 GPHFNPFGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 3.982e-18 Identity = 46/90 (51.11%), Postives = 53/90 (58.89%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 272 G H P K HG P D +RH A F + D+ I L GPNSIIGR VVH DDLGKGG++ S TGNAGGR+ACG+IG Sbjct: 60 GSHFNPENKNHGAPGDTDRHVGDLGNVTAEGG-VAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLACGVIG 148
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 278 GPH PA K+H P+DE+RH A + D +I L+GP SIIGR +V+H DDLG+GG+E S TGNAG R+ACG+IG + Sbjct: 62 GPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLACGVIGTE 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18 Identity = 47/91 (51.65%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 GPH P G HG E RH A TV DN + L GP S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 62 GPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_HORSE (Superoxide dismutase [Cu-Zn] OS=Equus caballus GN=SOD1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P K+HG P+DE RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 62 GAHFNPLSKKHGGPKDEERHVGDLGNVTADENGKADVDMKDSVISLSGKHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838444 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18 Identity = 46/91 (50.55%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 3 GPHSIPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 275 G H P K HG PEDENRH A + D I + GP SI+GR VVVHA DDLG+GG+E S TGNAG R ACG+IG+ Sbjct: 62 GSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152 The following BLAST results are available for this feature:
BLAST of CF838444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838444 ID=CF838444; Name=CF838444; organism=Citrus sinensis; type=EST; length=431bpback to top |