CF838460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31 Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 2 Query: 20 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 +KL ++ CM+V GP+++ A ++CG V+G +APCI YL GP+P CC GV +LN ARTTPDRQ AC CL AA S P LN A GLP+ACGV+IPYKIS ST+C+ VR Sbjct: 5 MKLACLVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31 Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 2 Query: 14 VALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 +A K+ +VLCM+V P A+AITCGQVT +LAPC+ YLR+ GP+ CC GV++L +ARTT DRQ AC CLK AAG+I +N A GLP CGV+IPYKIS STDCSKV+ Sbjct: 3 IAGKIACFVVLCMVVAAPC-AEAITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.222e-31 Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 2 Query: 5 SQTVALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 + +++LKL +VLCM+V PL+ A+T GQVT SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYKIS STDC+ V+ Sbjct: 2 ASSMSLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.222e-31 Identity = 64/91 (70.33%), Postives = 70/91 (76.92%), Query Frame = 2 Query: 83 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 ITCGQV+ SLAPCI YLR+GG +P CCNGVRSLN AA+TT DRQ ACNCLK A SI LN N A GLP CGVS+PYKIS STDC V+ Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 20 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 +KL ++ CM+V GP++ A ++CG V+G+LA CI YL GP+P CC GV +LN ARTTPDRQ AC CL AA S P LN A GLP+ACGV+IPYKIS ST+C+ VR Sbjct: 5 VKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 2 Query: 83 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 ITCGQV+ +LAPCI Y++ GG +P CCNG+R++N ARTT DR+ ACNCLKQ +GSIP +NPNNA LP CGV++PYKIS ST+C+ V+ Sbjct: 1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 14 VALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 ++LKL +VLCM+V PL+ A+T GQVT SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYKIS STDC+ V+ Sbjct: 1 MSLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.177e-31 Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 2 Query: 38 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 LV+CM+V P++ AI+CG VTG L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNC+K AA SI LN NNA LP CGV+IPYKIS ST+C+ V+ Sbjct: 12 LVMCMIVA-PMAEGAISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.177e-31 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 20 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 +KL ++ CM+V GP++ A ++CG V+G+LA CI YL GP+P CC+GV SLN ARTTPDRQ AC CL AA ++P +N A GLP+ACGV+IPYKIS +T+C+ V+ Sbjct: 5 VKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 20 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 +KL ++ CM+V GP++ A ++CG V+G+LA CI YL GP+P CC GV +LN ARTTPDRQ AC CL AA + P LN A GLP+ACGV+IPYKIS ST+C+ VR Sbjct: 5 VKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117 The following BLAST results are available for this feature:
BLAST of CF838460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838460 ID=CF838460; Name=CF838460; organism=Citrus sinensis; type=EST; length=602bpback to top |