CF838460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.161e-27 Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 23 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 K+ ++LCM+V P A+A+TCGQVT LAPC+ YL+ GP+ CC GV+ L +A+TT DR+TAC CLK AA +I ++ N A G+P C V+IPYKIS STDCS V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27 Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 23 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 K+ ++LCM+V P A+A+TCGQVT +LAPC+ YL + GP+ CC GV+ L A+TT DRQTAC CLK AA S L+ A LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27 Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 2 Query: 14 VALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 VA+ +V+A+V+ + T S AI+CGQV+ ++A C+ Y R G P CC+GVRSLN+AARTT DR+ ACNCLK AA I LN NA +P CGVS+PY IS STDCS+V Sbjct: 6 VAIAVVAAVVVVLAAT--TSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 20 LKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 +K ALV+CM+V PL A+AITCG V LAPCI YL+ CC G++SLN+AA + DR+TAC CLK AA SI +N A LPR CGVS+PY IS +T+C+ + Sbjct: 7 VKFTCALVMCMMVAAPL-AEAITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 2 Query: 23 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 K+ +V CM+V P A++++CG+VT LAPC+ YL GP+ CC GV+ L AA+T DR+TAC CLK AA SI ++ A GLP CGV+IPYKIS STDCS V+ Sbjct: 6 KIACFVVFCMVVVAP-HAESLSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26 Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 23 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 K+ ++LCM+V P A+A+TCGQVT +LAPC+ YL + GP+ CC GV+ L A+TT DRQ AC CLK AA S +L+ A LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.829e-26 Identity = 58/113 (51.33%), Postives = 75/113 (66.37%), Query Frame = 2 Query: 17 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 AL+ + VL + + + A AITCG V SL+PC+ YL GG +P PCC GV+ LN A+TTPDRQ AC CL+ AA + NP+ A GLP CGVSIPY IS ST+C+ ++ Sbjct: 4 ALRFFTCFVLTVFIVASVDA-AITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGV---NPSLASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26 Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 2 Query: 14 VALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 VA+ +V+A +L S A+TCGQV+ ++ PC+ Y R G P CC+GVRSLN+AARTT DR+ ACNCLK AA I LN A +P CGVSIPY IS STDCS+V Sbjct: 9 VAIAVVAAAAAVVLAA-TTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.642e-25 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 2 Query: 83 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 +TCGQV G+LA CI +L+ GG +P CC GV+++ ++RTT DR+ C+CLK AAG++ +NPNNA LP CGV+IPYKIS ST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25 Identity = 58/109 (53.21%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 29 VSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 V L+L + G +A AITCGQV L C+ Y R GG IP CC GVR+LN A+TTPDRQTACNCLK LN G+P CGV+IPY I + TDC+KVR Sbjct: 7 VCFLLLLAFLIG--TASAITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113 The following BLAST results are available for this feature:
BLAST of CF838460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838460 ID=CF838460; Name=CF838460; organism=Citrus sinensis; type=EST; length=602bpback to top |