CF838460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.189e-17 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 2 KSQTVALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 K ++ + +++ +V+ L+ P + AITC VTG+L PC+ YLRSGG CC G + L A RT DR+TAC C K AA + + P+ A LP CG+S I+ + +C+ + Sbjct: 2 KGTSMGVAILAMIVMAQLMVHP--SVAITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL-KVRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.552e-17 Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 80 AITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 A+TC VT +L PC+ YL+ G P P CC GVRSL AAA+T DR+ ACNC+K AA +LN A L CGV + Y +S + +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.552e-17 Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 80 AITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 A+TC VT +L PC+ YL+ G P P CC GVRSL AAA+T DR+ ACNC+K AA +LN A L CGV + Y +S + +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15 Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 83 ITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 + CGQV SLA CI +L G P CC GV++L A T+ DR+ AC C+K AA P + + A LP+ CGV I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14 Identity = 41/95 (43.16%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 71 SAQAITCGQVTGSLAPCIVYLRSG-GPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 S AI+C V L PC+ YL SG G P CC+GV+SL AA T+ D++ AC C+K A S+ + P A L CG S+P S + DC+ V Sbjct: 22 SESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.168e-13 Identity = 45/120 (37.50%), Postives = 61/120 (50.83%), Query Frame = 2 Query: 2 KSQTVALKLVSALVLCMLVTGPLSAQ-AITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVS-IPYKISISTDCSKV 352 K A+ +V +V M V G + + AI+C QV ++ PC YL P CC +R L++ + TPDRQ CNCLK A S + A LP C V+ + IS + DCSKV Sbjct: 4 KKMVEAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CF838460 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.375e-12 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 2 Query: 83 ITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 + CGQV +L+ C+ +L P + CC GV L A T D++ AC C+K AA PN+ + A LP CGV I IS +T+C ++ Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91 The following BLAST results are available for this feature:
BLAST of CF838460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838460 ID=CF838460; Name=CF838460; organism=Citrus sinensis; type=EST; length=602bpback to top |