CF838475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_HUMAN (40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_BOVIN (40S ribosomal protein S27 OS=Bos taurus GN=RPS27 PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27L_RAT (40S ribosomal protein S27-like protein OS=Rattus norvegicus GN=Rps27l PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27L_MOUSE (40S ribosomal protein S27-like protein OS=Mus musculus GN=Rps27l PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27L_HUMAN (40S ribosomal protein S27-like protein OS=Homo sapiens GN=RPS27L PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27L_BOVIN (40S ribosomal protein S27-like protein OS=Bos taurus GN=RPS27L PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.260e-14 Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 + ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 41 YKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_HOMAM (40S ribosomal protein S27 OS=Homarus americanus GN=RPS27 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.788e-12 Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 18 FHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 F I+TVFSH+QTVV C C +VLCQPTGG+A+LT+GCSFR+K Sbjct: 41 FKISTVFSHAQTVVACVGCATVLCQPTGGKAKLTDGCSFRKK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_CAEEL (40S ribosomal protein S27 OS=Caenorhabditis elegans GN=rps-27 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.796e-12 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 9 SRLFHITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 143 S F I+TVFSH+ TVVVC C +VLCQPT G+A+LTEGCSFR+K Sbjct: 38 SGCFKISTVFSHATTVVVCVGCNTVLCQPTRGKAKLTEGCSFRKK 82
BLAST of CF838475 vs. ExPASy Swiss-Prot
Match: RS27_DICDI (40S ribosomal protein S27 OS=Dictyostelium discoideum GN=rps27 PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.513e-11 Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 3 Query: 24 ITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 149 ITTVFSH+Q VV+C +C +V+ QPTGGRAR+T GC R+K D Sbjct: 44 ITTVFSHAQNVVICSSCSTVIAQPTGGRARITAGCRLRQKSD 85 The following BLAST results are available for this feature:
BLAST of CF838475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838475 ID=CF838475; Name=CF838475; organism=Citrus sinensis; type=EST; length=332bpback to top |