CF838480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 24 YRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 YRGVR+RPWG++AAEIRDP + TRVWLGTF+T FRG +AK NFP Sbjct: 25 YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDSTTV 215 K +RGVRQRPWG+WAAEIRDP R RVWLGT++T +GP A NFP + V Sbjct: 96 KKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEV 161
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 24 YRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFP 200 +RGVR+RPWG++AAEIRDP + TRVWLGTF++ RGP+AK NFP P Sbjct: 28 FRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 21 NYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFP 200 +YRGVR+RPWG++AAEIRDP + TRVWLGTF+T RG +AK NFP P Sbjct: 11 HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSP 70
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDP-RRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 K+YRGVRQRPWGK+AAEIRDP R+ TRVWLGTF+T RG +A +NFP Sbjct: 143 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFP 202
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDP-RRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 K+YRGVRQRPWGK+AAEIRDP R+ TRVWLGTF+T RG +A +NFP Sbjct: 136 KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFP 195
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 33/58 (56.90%), Postives = 35/58 (60.34%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNF 191 K YRGVRQRPWGKWAAEIRDP + R+WLGTF T RGP A NF Sbjct: 115 KKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 172
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 24 YRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 YRGVR+RPWG++AAEIRDP + +RVWLGTF+T FRG +AK NFP Sbjct: 20 YRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDP-RRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 K+YRGVRQRPWGK+AAEIRDP +R +RVWLGTF+T RG +A LNFP Sbjct: 154 KHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFP 213
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 34/65 (52.31%), Postives = 39/65 (60.00%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDSTT 212 K YRGVRQRPWGK+AAEIRDP TR+WLGTF T +GP+A NF P + T Sbjct: 103 KKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPT 167 The following BLAST results are available for this feature:
BLAST of CF838480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838480 ID=CF838480; Name=CF838480; organism=Citrus sinensis; type=EST; length=772bpback to top |