CF838481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 90 MQIFVKTLTGKTITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 317 M I VKTLTGK I L+++ +D + + R+++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 84.7297 bits (208), Expect = 4.729e-16 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 318 MQIFVKTLTGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 M I VKTLTGK I L+++ +D + K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 90 MQIFVKTLTGKTITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 317 M + VKTLTGK I++E++ SD + ++ +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 80.1073 bits (196), Expect = 1.165e-14 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 318 MQIFVKTLTGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 M + VKTLTGK I++E++ SD + K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 102 VKTLTGKTITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 VK L G + V +S T+ + +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V+ G + EV + T++ K K+ +E + DQ L F G+ +ED L +Y ++ + T+ LRLRGG Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 96 IFVKTLTGKTITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 + V++ +T + D++ + ++ K +P Q L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ KA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L GG Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 71.2478 bits (173), Expect = 5.411e-12 Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 102 VKTLTGKTITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 VK L G + + SS ++ + +I K G+ QQRL +G L+D LA + ST+ LV+ + + I V+ G++ T EV + T+ K ++ EG+ D L F GK LED L +Y ++ ST+ + LRLRGG Sbjct: 7 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of CF838481 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 43/146 (29.45%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 126 ITLEVESSDTIDNVGGRIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIEGGKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 545 +T + SD + + I+ + + Q L+ K L+ R L+ Y I KE+T+HL L++ + + G+ L V S ++ K I++ +PP +Q + GK+LEDG+ +ADYNI+ S L L GG Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161 The following BLAST results are available for this feature:
BLAST of CF838481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838481 ID=CF838481; Name=CF838481; organism=Citrus sinensis; type=EST; length=676bpback to top |