CF838486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 119 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGP-PTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGP--------TKVTTASSTPAALSPKV 583 GSG DD+ DG RKKLRLSK+Q+ +LE KQK LA +L L+PRQVEVWFQNRRAR+KLKQTE++CEYLKRW L ++N+RL++E+ +LRA+K P P S A+TL+MCP C RV T P + T +SS+ AA + V Sbjct: 99 GSGVDDDD-----GADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAV 268
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.126e-31 Identity = 81/169 (47.93%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 122 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 589 + + D+E+S GG RKKLRLSK+Q+ +LE KQK LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR +LT++NRRL RE++ELRA+K+ H P +TL+MCP CERV + A TT +++ AA + V T Sbjct: 142 AAAASDDEDS-----GGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 5.126e-31 Identity = 81/169 (47.93%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 122 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 589 + + D+E+S GG RKKLRLSK+Q+ +LE KQK LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR +LT++NRRL RE++ELRA+K+ H P +TL+MCP CERV + A TT +++ AA + V T Sbjct: 142 AAAASDDEDS-----GGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.126e-31 Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 122 SGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV-------TTTAVDKGPTK 538 S DDEE G RKKLRL+K+QS LLE KQK+ LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LK+ +LT++NRRLQ+E+++L+A+K+ P + +PA+TL+MCP CER+ TTAVD+ K Sbjct: 113 SDDHDDEE-------GVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMH------MPAATLTMCPSCERLGGGGVGGDTTAVDEETAK 256
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.668e-30 Identity = 74/141 (52.48%), Postives = 94/141 (66.67%), Query Frame = 2 Query: 119 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVT 508 GS + D+E DG RKKLRLSK+QS +LE KQK+ LA QL L+ RQVEVWFQNRRAR+KLKQTE++CE+L+R +LTE+NRRLQ+EV ELRA+K+ P + P +TL+MCP CE V+ Sbjct: 114 GSRGISDDE------DGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYM-----HMSPPTTLTMCPSCEHVS 243
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.062e-28 Identity = 78/172 (45.35%), Postives = 98/172 (56.98%), Query Frame = 2 Query: 134 DDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVISPHSCEPLPA---STLSMCPRCER---VTTTAVDKGPTKVTTASSTPAALSPKVGTPA 595 DDE+ GG RKKLRLSKEQS LE KQK +LA +L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR LT +NRRLQREV ELR A++ + + LPA + +CP CE V A + +V PAA++ P+ Sbjct: 142 DDEDNG-----GGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCEHSKVVAAAASESFSPRVFAGGGAPAAITAAAAVPS 308
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.305e-28 Identity = 73/138 (52.90%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 125 GSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 505 G+ D+EE+ G RKKLRLSK+QS LE KQK LA +L L RQVEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRLQ+E ELR +K+ P + P +TL MCP CERV Sbjct: 116 GTSDEEEDG-----GETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSP-----QFYGQMTPPTTLIMCPSCERV 243
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.928e-28 Identity = 76/172 (44.19%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 134 DDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEE----LRAMKVGPPTVISPHSCEPLPASTLSMCPRCER---VTTTAVDKGPTKVTTASSTPAALSPKVGTPA 595 DDE+ GG RKKLRLSKEQS LE KQK +LA +L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR LT +NRRLQREV E LR P + H + +CP CE V A + +V PAA++ P+ Sbjct: 142 DDEDNG-----GGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCEHSKVVAAAASESFSPRVFAGGGAPAAITAAAAVPS 308
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 9.049e-28 Identity = 65/125 (52.00%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 164 DGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 505 +G RKKLRL+K+QS LLE KQK+ LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LK+ +L ++N RLQ+E++EL+ +K+ P + +PASTL+ CP CER+ Sbjct: 107 EGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMH------MPASTLTKCPSCERI 225
BLAST of CF838486 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.182e-27 Identity = 73/138 (52.90%), Postives = 89/138 (64.49%), Query Frame = 2 Query: 125 GSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 505 G+ D+EE+ G RKKLRLSK+QS +LE KQK LA +L L RQVEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRL++E ELRA+K+ P + P +TL MCP CERV Sbjct: 120 GTSDEEED----YGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLY-----GQMSPPTTLLMCPSCERV 248 The following BLAST results are available for this feature:
BLAST of CF838486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838486 ID=CF838486; Name=CF838486; organism=Citrus sinensis; type=EST; length=779bpback to top |