CF838516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_HALOH (Isoleucyl-tRNA synthetase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=ileS PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.243e-44 Identity = 93/204 (45.59%), Postives = 130/204 (63.73%), Query Frame = 2 Query: 251 IIVASDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +++A +LV + EA+ V+ + G++LEN R HP ++R ++I GD++T E GTG VHTAPGHG +DY+ LKY L I +P+D+ G FTEEA +F+G+ D N V K LDE+ L+ H+YP+ WR K IFRAT+QWFAS+E ++ A+ AI V W P R++ M S R+DWCI RQ+ WGVPI Sbjct: 267 LVMARELVDRVMEEAEVENYKVVGQAFKGTELENKRCRHPFEDRDS-ILILGDHVTLEQGTGCVHTAPGHGHDDYLVGLKYDLDIYAPMDNRGVFTEEAERFAGM-YYDDVNKEVTKILDEKGLLMNLSFISHQYPHCWRCKGALIFRATDQWFASIEAIKEEALKAIHSVDWYPAWGEERMANMISERTDWCISRQKKWGVPI 468
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_SHELP (Isoleucyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ileS PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44 Identity = 95/212 (44.81%), Postives = 129/212 (60.85%), Query Frame = 2 Query: 230 KDQKKVFIIVASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 KD K IIVA +LV + ++G +L + T+ G LE R+ HP + PV+IG D++T +SGTG+VHTAPGHGQ+D+V KYGL + +PV D G + + F+G V N VV L+E+ +L+ Y H YP+ WR K P IFRAT QWF S++ G R ++ I + +W+P +RI M R DWCI RQRTWGVPI Sbjct: 268 KDGSKRAIIVAQELVESCIERYGAELHSVLGTVKGQALELLRFKHPFYDFDVPVIIG-DHVTVDSGTGVVHTAPGHGQDDFVIGQKYGLEVANPVGDNGVYKPDTEFFAGQHVF-KANDNVVALLEEKGALLNHVAYRHSYPHCWRHKTPIIFRATPQWFISMDQKGLRTQSLSEIEKTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPI 477
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_PERMH (Isoleucyl-tRNA synthetase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=ileS PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44 Identity = 96/218 (44.04%), Postives = 132/218 (60.55%), Query Frame = 2 Query: 227 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF-SGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG-------FRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 L+ + KV+I VA DL+ + K G + + K + G +LE Y HP +R + + +++ +GTGLVH APGHGQEDY+ +YG+ +PVDDEG+FT+EA +F GL V + N +V+ L E L+ E +H YP+ WR K P IFRAT QWF S++G R A+ I +VKW+P NRI +M R DWCI RQR+WGVPI Sbjct: 258 LRSEDKVYI-VAKDLLESFSEKTGIEGEVIKEVKGRELEFLEYRHPFIDRVSKIYLS-EFVELGTGTGLVHMAPGHGQEDYIIGQRYGVEAFAPVDDEGRFTDEAPEFIQGLRVF-EANERIVEKLRENGVLLHHETVKHSYPHCWRCKNPVIFRATPQWFISMDGITEKGETLRGEALKEIERVKWIPHWGENRIKSMIENRPDWCISRQRSWGVPI 472
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_LISMO (Isoleucyl-tRNA synthetase OS=Listeria monocytogenes GN=ileS PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44 Identity = 92/202 (45.54%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +VA L+P+L K G + + KT+ GS+L+ HP +R +V+ G++ T E+GTG VHTAPGHG++D++ KY L IL+P+DD G FTEEA F G+ N V + L+E +L+ E H YP+DWRTKKP IFRAT QWFAS++ FR + A+ V W P R+ M R DW I RQR WGVP+ Sbjct: 262 VVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPL 461
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_LISIN (Isoleucyl-tRNA synthetase OS=Listeria innocua GN=ileS PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44 Identity = 92/202 (45.54%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +VA L+P+L K G + + KT+ GS+L+ HP +R +V+ G++ T E+GTG VHTAPGHG++D++ KY L IL+P+DD G FTEEA F G+ N V + L+E +L+ E H YP+DWRTKKP IFRAT QWFAS++ FR + A+ V W P R+ M R DW I RQR WGVP+ Sbjct: 262 VVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPL 461
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_LISMH (Isoleucyl-tRNA synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ileS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +VA L+P+L K G + + KT+ GS+L+ HP +R +V+ G++ T E+GTG VHTAPGHG++D++ KY L +L+P+DD G FTEEA F G+ N V + L+E +L+ E H YP+DWRTKKP IFRAT QWFAS++ FR + A+ V W P R+ M R DW I RQR WGVP+ Sbjct: 262 VVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPL 461
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_LISMF (Isoleucyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=ileS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +VA L+P+L K G + + KT+ GS+L+ HP +R +V+ G++ T E+GTG VHTAPGHG++D++ KY L +L+P+DD G FTEEA F G+ N V + L+E +L+ E H YP+DWRTKKP IFRAT QWFAS++ FR + A+ V W P R+ M R DW I RQR WGVP+ Sbjct: 262 VVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPL 461
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_LISMC (Isoleucyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ileS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 91/202 (45.05%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +VA L+P+L K G + + KT+ GS+L+ HP +R +V+ G++ T E+GTG VHTAPGHG++D++ KY L +L+P+DD G FTEEA F G+ N V + L+E +L+ E H YP+DWRTKKP IFRAT QWFAS++ FR + A+ V W P R+ M R DW I RQR WGVP+ Sbjct: 262 VVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWVISRQRAWGVPL 461
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYIM_SCHPO (Isoleucyl-tRNA synthetase, mitochondrial OS=Schizosaccharomyces pombe GN=ism1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 85/203 (41.87%), Postives = 125/203 (61.58%), Query Frame = 2 Query: 254 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA--GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 +++ +LVP L+ G K + + + + Y +P+ +Q + +Y+T + GTG+VH APGHG EDY+ L+ L SP+DD G++T+EA G GL+VLGDG V+ + Q ++ PY+H+YPYDWRT KP I RAT QWF S+E R+ A+ A+ VK +PP + R+ +GR +WCI RQR WG+PI Sbjct: 293 LMSDNLVPNLDFMQGAKRLA--SCPSDIISSFTYENPLLPKQSFPFLQSNYVTNDIGTGIVHVAPGHGMEDYLLGLENNLRPFSPLDDYGRYTKEALDGSLEGLEVLGDGGKKVISIMKNQNMIVKVSPYKHRYPYDWRTHKPLILRATPQWFISLENERKTAIKALDSVKMIPPNSRARLLGFLNGRPEWCISRQRAWGLPI 493
BLAST of CF838516 vs. ExPASy Swiss-Prot
Match: SYI_HALHL (Isoleucyl-tRNA synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ileS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.618e-44 Identity = 95/213 (44.60%), Postives = 124/213 (58.22%), Query Frame = 2 Query: 224 VLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPPQAINRISAMTSGRSDWCIXRQRTWGVPI 856 V D + ++ A L TL+ + G+DLE HP +RQ PVV+G +++TT+ GTG VHTAPGHGQED+ YGL + +PVD G F E+ F+GL+V D N VV+ L+ + +L E Y H YP+ WR K P IFRAT QWF ++ G R+ A+ I V+W+P RI AM GR DWCI RQR WGVPI Sbjct: 267 VALDHSERLVLAAELLEATLQRAGVECYEVVGRCRGADLEGLSLQHPFLDRQVPVVLG-EHVTTDGGTGCVHTAPGHGQEDFEVGQCYGLEVTNPVDGAGCFFEDTEHFAGLNVF-DANPRVVEVLESRGALFHHEKYRHSYPHCWRHKTPVIFRATPQWFIDLDRHGMRECALAGIEGVRWMPDWGQARIDAMVRGRPDWCISRQRHWGVPI 477 The following BLAST results are available for this feature:
BLAST of CF838516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838516 ID=CF838516; Name=CF838516; organism=Citrus sinensis; type=EST; length=858bpback to top |