CF838532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO_DROPS (Mitochondrial Rho GTPase OS=Drosophila pseudoobscura pseudoobscura GN=Miro PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.282e-38 Identity = 85/226 (37.61%), Postives = 131/226 (57.96%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRR-----LE---------------VKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 + VRI++ G+ G GK+SLI++ ++ +P VPP +P + P++VP +I+D S + LG E+ +A V + Y+ D ++LD +++ WLP +R LE ++ P+++VG K+DL D + S+ + IM+ F EIE+C+ECSA + E+FYYAQKAVLHPT PL+ E Q L P C ++L RIF +CD D D L+D Sbjct: 9 RKNVRILLVGDAGVGKTSLILSLVSEEYPEEVPPRAEEITIPANVTPEQVPTSIVDFSSVEQTEETLGLEINKAHVVCIVYSVDDDDSLDRITSHWLPLIRSKCNATLEGDAETEAETEAAGEGLRKPIVLVGNKIDLIDYSTMDSV----LAIMEDFPEIESCVECSAKTLHNISEMFYYAQKAVLHPTSPLYIMEDQELTPACKKSLVRIFKICDTDGDNLLND 230
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO_DROME (Mitochondrial Rho GTPase OS=Drosophila melanogaster GN=Miro PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 81/228 (35.53%), Postives = 128/228 (56.14%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELR----------------------RLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 + VRI++ G+ G GK+SLI++ ++ +P VPP +P + P++VP +I+D + + L E+ +A V + YA D +TLD +++ WLP +R R ++ P+++VG K+DL + + S+ + IM+ + EIE+C+ECSA + E+FYYAQKAVLHPT PL+ E Q L C ++L RIF +CD D D L+D Sbjct: 9 RKNVRILLVGDAGVGKTSLILSLVSEEYPEEVPPRAEEITIPANVTPEQVPTSIVDFSAVEQSEDALAAEINKAHVVCIVYAVDDDDTLDRITSHWLPLVRAKCNPSLDGEGDAEAEAEGDTQREPIRKPIVLVGNKIDLIEYSTMDSV----LAIMEDYPEIESCVECSAKSLHNISEMFYYAQKAVLHPTSPLYMMEEQELTSACKKSLVRIFKICDIDGDNLLND 232
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_YARLI (Mitochondrial Rho GTPase 1 OS=Yarrowia lipolytica GN=GEM1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.418e-35 Identity = 88/218 (40.37%), Postives = 127/218 (58.26%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFY--PDR-VPITIIDTP--SSVEDRGKLGEELRRADAVVLTYA----CDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLD------LRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 +RIVVCG++G GKSSLI + DT+ N+ +LPP +P+ F PD + I+DT +S + L E+R+A+ + L Y+ C+R +S FWLP R L V +P+++ D RD + +S E M+PI+++F+EIE+CI SA + + FY QKAV+HP PLFD + LKP V AL+R+F L D D+DG LSD Sbjct: 6 IRIVVCGDEGVGKSSLITSLIKDTYVPNIQKLLPPITIPKGFSSSPDAPLSTVIVDTQFSNSPAEAEHLHREIRQANVIWLVYSDHYSCER------VSIFWLPYFRNLGVNLPIVLCANVFDDVDSWNSRDSERIISDE--MIPILREFKEIESCIRVSAKLNHNINQAFYLCQKAVMHPIAPLFDAKEGKLKPNAVAALQRVFFLSDRDQDGYLSD 215
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO_CAEEL (Mitochondrial Rho GTPase OS=Caenorhabditis elegans GN=K08F11.5 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 81/206 (39.32%), Postives = 121/206 (58.74%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRL---EVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 VRIV+ G++G GK+SL+++ D + VP L +P D P+ V +I+D ED + E+R+A+ + + Y+ T+D + T WLP +R+ + PVI+VG K D N ++PIM+ E+ETC+ECSA V E+FYYAQKAV++PT PL+D +++ L R +AL R+F +CD D DG LSD Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSDGTANNTDK-----ILPIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRARKALIRVFKICDRDNDGYLSD 210
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_YEAST (Mitochondrial Rho GTPase 1 OS=Saccharomyces cerevisiae GN=GEM1 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.088e-33 Identity = 86/223 (38.57%), Postives = 120/223 (53.81%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFY--PDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLD----------LRDENQQVSLE-----QVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K +R+V+CG++G GKSSLIV+ F + VLPP +P DF P P + +S D L EL+ AD + L Y CD E+ D +S FWLP R L + +PVI+ K D + EN ++ + +PI+ +F+EI+TCI+ SA Q + + FY Q+A+ HP PLFD LKP V ALKRIF+L D ++D L D Sbjct: 3 KETIRVVICGDEGVGKSSLIVSLTKAEFIPTIQDVLPPISIPRDFSSSPTYSPKNTVLIDTSDSDLIALDHELKSADVIWLVY-CDH-ESYDHVSLFWLPHFRSLGLNIPVILCKNKCDSISNVNANAMVVSENSDDDIDTKVEDEEFIPILMEFKEIDTCIKTSAKTQFDLNQAFYLCQRAITHPISPLFDAMVGELKPLAVMALKRIFLLSDLNQDSYLDD 223
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO_CAEBR (Mitochondrial Rho GTPase OS=Caenorhabditis briggsae GN=CBG01740 PE=3 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33 Identity = 79/213 (37.09%), Postives = 122/213 (57.28%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRL---EVKVPVIVVGCKLDLRDEN-------QQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 VRIV+ G++G GK+SL+++ D + VP L +P D P+ V +I+D E+ L E+R+A+ + + Y+ T++ + WLP +R+ + P+I+VG K D N Q + ++PIM+ E+ETC+ECSA V E+FYYAQKAV++PT PL+D +++ L R +AL R+F +CD D DG LSD Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEEEDNWLISEMRQANVICVVYSVTDDTTVERIQEKWLPLIRQAFGEYHETPIILVGNKSDGTANNTDKLPSGQSLVSSLQILPIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRAKKALIRVFKICDRDNDGYLSD 222
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_ASHGO (Mitochondrial Rho GTPase 1 OS=Ashbya gossypii GN=GEM1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.571e-32 Identity = 84/222 (37.84%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDF----YPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSL-------------EQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALS 770 K +RIVVCG+KG GKSSLI D F N+ LP +P DF Y + I ++DT +S D L +EL+ AD + L YA ++ + ++ +W+ R L + +PVI+ K D E + +L ++ +PI++ F+E+ETCI+CSA ++ V + FY Q+A+ HP PLFD LKP ++ALKRIF+L D D+D LS Sbjct: 3 KERIRIVVCGDKGVGKSSLIACLVKDQFIPNLQDALPAVTIPRDFSASPYSPQNTI-LVDTKNS--DLAGLQKELKNADVIWLVYADH--DSYERIALYWMMMFRSLGLNLPVILCRNKSDDGIEYCRSNLTAGGEGDCGTIVEDEEFIPILKAFKEVETCIKCSAKNKLNVNQAFYLCQRAITHPLAPLFDARIGELKPLAIQALKRIFVLSDKDQDDYLS 219
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_KLULA (Mitochondrial Rho GTPase 1 OS=Kluyveromyces lactis GN=GEM1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.971e-32 Identity = 82/225 (36.44%), Postives = 125/225 (55.56%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVP---ITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVM----------------MPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 KT +RIVVCG+ G GK+SLI D F + + VLPP +P+DF R ++DT +S D L +EL+ AD + L Y+ ++ + ++ +W+ R L V +PV++ K D DE + +S +M +PI+++F+E+ETCI+ SA + V + FY Q+ + +P PLFD LKP V ALKR+F+L D D+DG L+D Sbjct: 3 KTRIRIVVCGDSGVGKTSLIACLVKDQFISWLQDVLPPITIPKDFSSSRYSPENTVVVDTGNS--DLATLHKELKNADVIWLVYSDH--DSYERIALYWMMMFRSLGVNLPVVLCRNKCD--DEVEFLSSANIMDSDDDQLDNKIEDEEFIPILREFKEVETCIKASAKFKFNVNQAFYLCQRTITNPVAPLFDARIGELKPLGVLALKRVFVLSDMDQDGFLND 221
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_SCHPO (Mitochondrial Rho GTPase 1 OS=Schizosaccharomyces pombe GN=gem1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31 Identity = 74/206 (35.92%), Postives = 122/206 (59.22%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDR---VPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQV-SLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALS 770 VR+V+CG++G GKSSLI + ++P V P +P + PD V + ++DT S +R L E+++A+ + L Y+ + + + +S FWLP R L V VP+++ K + D Q + ++E M+P++ +F+EIE CI CSAL++I V E+FY + V++P PL+D + + ++ + AL RIF L D + D LS Sbjct: 4 VRVVICGDQGVGKSSLISALIQEDNVTSIPKVFPIISIPSN--PDSNDDVSLVLVDTQSDSNEREYLAAEIKKANVICLVYSDNY--SYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFYMCRACVIYPITPLWDAKERTMRKATIHALSRIFFLIDKNNDDLLS 205
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_CANGA (Mitochondrial Rho GTPase 1 OS=Candida glabrata GN=GEM1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.277e-30 Identity = 76/217 (35.02%), Postives = 119/217 (54.84%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDF----YPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVS-------LEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K +R+V+CG+ G GK+SLIV+ F N+ VLPP +P DF Y + + +IDT +S D + EL+ AD + L Y+ ++ + +S +W+ R L + +PVI+ K D N + ++ +PI+ F+E++TC++ SA V + FY Q+++ +P PLFD + LKP V AL RIF L D D+DG L+D Sbjct: 3 KETIRVVICGDDGVGKTSLIVSLVKGQFIPNLQAVLPPVTIPRDFSSSPYSPKNTV-LIDTDNS--DPLAIQRELKNADVIWLVYS--DKDSYERISLYWMITFRSLGLNIPVILCKNKCDQYTTNSPLEDFLDTKIEDEEFIPILMAFKEVDTCVKASAKTHFDVNQSFYLCQRSISYPISPLFDAKVGDLKPSAVAALSRIFFLSDEDQDGFLND 214 The following BLAST results are available for this feature:
BLAST of CF838532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838532 ID=CF838532; Name=CF838532; organism=Citrus sinensis; type=EST; length=774bpback to top |