CF838532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_CANAL (Mitochondrial Rho GTPase 1 OS=Candida albicans GN=GEM1 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23 Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 312 TIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDL---RDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALS 770 TIIDT SS D L +EL+RAD + L Y+ T + +S W+P R + V +P+I+ K DL N + + +P++ +F+EIE + CSA V E FY Q+AV HP P+FD + LKP ++ LKRIF L D D+DG L+ Sbjct: 38 TIIDTSSS--DMTNLQKELKRADVIWLVYSDHY--TYERISLHWMPLFRSMGVNLPIILCANKSDLFPKSKSNLKSTNSDEFVPLINEFKEIEAGVRCSAKNNYNVVEAFYLCQRAVTHPISPIFDAKEGNLKPGAIKPLKRIFWLSDTDQDGYLN 189
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-------MQQFREIETCIECSALKQIQVPEVFYYAQKAVLHP 662 ++ V G+ GK+ L+++ ++TFP + VP V + + + + DT ED +L R AD +L ++ + + +S W+PELR VP+I+VG KLDLRD+ Q + +PI +++ IECSA Q V VF A K VL P Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQ-EDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 58/192 (30.21%), Postives = 91/192 (47.40%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-MQQFREIETC------IECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCV 713 ++ V G+ GK+ ++++ ++TFP + VP V + V + + DT ED +L R AD +L ++ + + ++ W+PELR VP+I+VG KLDLRD+ Q +PI Q E++ IECS+ Q V VF A K VL P ++ + K RCV Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQPPK---QKKKKKNKNRCV 194
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 53/175 (30.29%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIM----QQFREI---ETCIECSALKQIQVPEVFYYAQKAVLHP 662 ++ V G+ GK+ L+++ ++TFP + VP V V + + DT ED +L R AD +L ++ + + ++ W+PELR VP+I+VG KLDLRD+ ++ +PI ++ R++ IECS+ Q V VF A K VL P Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.406e-11 Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIM----QQFRE---IETCIECSALKQIQVPEVFYYAQKAVLHP 662 V+ V G+ GK+ L+++ ++TFP + VP V V + + DT ED +L R AD +L ++ + + +S W+PEL+ VP+++VG KLDLRD+ Q +PI ++ R+ T IECS+ Q V VF A + VL P Sbjct: 7 VKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-------MQQFREIETCIECSALKQIQVPEVFYYAQKAVLHP 662 ++ V G+ GK+ L+++ ++TFP + VP V V + + DT ED +L R AD +L ++ + + +S W+PEL+ VP+I+VG KLDLRD+ Q +PI +++ IECS+ Q V VF A + VL P Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 52/187 (27.81%), Postives = 84/187 (44.92%), Query Frame = 3 Query: 126 ASAANSGPGGKTGVRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQ-QVSLEQVMMPIMQQFREIE------TCIECSALKQIQVPEVFYYAQKAVLHP 662 A+ + S T ++ V G+ GK+ L+++ ++TFP + VP V V + + DT + R AD +L ++ + + ++ W+PELR VP+++VG K DLRD Q + +Q +E+ IECS+ Q+ V VF A K VLHP Sbjct: 6 AATSTSSATATTFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHP 192
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 57/191 (29.84%), Postives = 91/191 (47.64%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-MQQFREIET------CIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRC 710 ++ V G+ GK+ ++++ ++TFP + VP V + V + + DT ED +L R AD +L ++ + + +S W+PEL+ VP+I+VG KLDLRD+ Q +PI Q E+ IECS+ Q+ V VF A K VL P P ++ +A + C Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQP--PKAKKKKKAQRGAC 194
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-MQQFREIE------TCIECSALKQIQVPEVFYYAQKAVLHP 662 ++ V G+ GK+ ++++ ++TFP + VP V + V + + DT ED +L R AD +L ++ + + ++ W+PELR VP+I+VG KLDLRD+ Q +PI Q E++ IECS+ Q V VF A K VL P Sbjct: 6 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQP 179
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGE-ELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPI-MQQFREIETCI------ECSALKQIQVPEVFYYAQKAVLHPTGP 671 ++ V G+ GK+ ++++ ++TFP + VP V V + + DT ED +L R AD +L ++ + + +S W+PELR VP+++VG KLDLR++ Q + PI Q E++ I ECS+ Q V VF A K VL P P Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ-EDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQPPKP 183 The following BLAST results are available for this feature:
BLAST of CF838532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838532 ID=CF838532; Name=CF838532; organism=Citrus sinensis; type=EST; length=774bpback to top |