CF838544

Overview
NameCF838544
Unique NameCF838544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34
Identity = 71/125 (56.80%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GKYE+GR +G GTFAKV  ARN +TG+ +A               EQI+REI+ MK++KH ++V+L+EVMASK+KI+  ++ V GGELF+KI   GR++ED AR YFQQLI AVD+CHSRGVYHR
Sbjct:   12 GKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKEDEARRYFQQLIHAVDYCHSRGVYHR 136          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.191e-34
Identity = 72/125 (57.60%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GKYELGR +G GTFAKV  AR+ +TG  +A               EQIKREIS MK++KH ++V ++EVM SK+KIY  ++ V GGELF+ I   GR+RED AR YFQQLI+AVD+CHSRGVYHR
Sbjct:   11 GKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHR 135          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.397e-33
Identity = 68/128 (53.12%), Postives = 92/128 (71.88%), Query Frame = 2
Query:  380 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKG-RLREDVARVYFQQLISAVDFCHSRGVYHR 760
            ++ G+Y+LGR+LG GTFAKVY A  L TG+++A               EQ+KRE+ VM+ V H+H++ LHEVMA++S+IYF M+   GGELF ++++  R  E VAR YFQQLI+AV+FCHSRGVYHR
Sbjct:   12 VIMGRYKLGRLLGRGTFAKVYKAYKLATGEAVAIKVFDKEAVQRSGTVEQVKREVDVMRRVHHRHVIRLHEVMATRSRIYFVMEYASGGELFTRLSRSPRFPEPVARRYFQQLITAVEFCHSRGVYHR 139          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GKYELGR +G GTFAKV  AR+ +TG  +A               EQIKREIS MK++KH ++V ++EVM SK+ IY  ++ V GGELF+ I   GR+RED AR YFQQLI+AVD+CHSRGVYHR
Sbjct:   11 GKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHR 135          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.056e-33
Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  353 NGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            N  GDD  + L GKY+LG++LG G FAKVY A +LQ G                     +KREISVM+ ++H HIV L EV+A+K+KIYF M+L KGGELF+++   R  E ++R YF+QLISAV +CH+RGV+HR
Sbjct:   14 NVTGDDNKSALFGKYDLGKLLGSGAFAKVYQAEDLQNGGESVAIKVVQKKRLKDGLTAHVKREISVMRRLRHPHIVLLSEVLATKTKIYFVMELAKGGELFSRVTSNRFTESLSRKYFRQLISAVRYCHARGVFHR 149          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = 2
Query:  356 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GGG  R     GKYE+GR +G GTFAKV  A+N ++G+S+A               +QIKREIS+MK+V+H ++V LHEV+AS+ KI+  ++ + GGELF+KI + GRL E  AR YFQQLI  VDFCHS+GVYHR
Sbjct:    3 GGGALRRV---GKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHR 135          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.545e-32
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:  368 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX--EQIKREISVMKMV-KHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKG--RLREDVARVYFQQLISAVDFCHSRGVYHR 760
            ++ T++  +YELGR LGHGTF+KVY AR+L +G+++A                 +QI+RE++VM++V +H ++V LHEVMAS+SKIYF M+LV+GGEL  ++  G  RL ED AR YF QL++AVDFCHSRGVYHR
Sbjct:    3 EKGTVVMSRYELGRSLGHGTFSKVYQARSLVSGETVAVKVIDKEKALRAGAGMVDQIEREVAVMRLVGRHPNVVRLHEVMASRSKIYFVMELVRGGELLARLVAGGGRLGEDAARRYFHQLVAAVDFCHSRGVYHR 138          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.545e-32
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GKYELGR +G GTFAKV  A+N++TG  +A               EQI+REI  MK+++H ++V LHEVM SK++I+  ++ V GGEL + IA  GRL+ED AR YFQQLI+AVD+CHSRGVYHR
Sbjct:   17 GKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHSRGVYHR 141          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            GKYELGR +G GTFAKV  A+N +TG+S+A               +QIKREIS+MK+V+H  +V L+EV+AS++KIY  ++ + GGELF+KI + GRL E  AR YF QLI  VD+CHS+GVYHR
Sbjct:    7 GKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHR 131          
BLAST of CF838544 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.708e-31
Identity = 67/125 (53.60%), Postives = 91/125 (72.80%), Query Frame = 2
Query:  389 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHR 760
            G+YE+GR +G GTFAKV  A +  TG ++A                QIKREIS+MK+V+H +IV L+EV+A K+KIY  ++L+ GGELF+KIA+ G+LRE+ AR YFQQLI A+++CHS+GVYHR
Sbjct:   16 GRYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYCHSKGVYHR 140          
The following BLAST results are available for this feature:
BLAST of CF838544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 282
Match NameE-valueIdentityDescription
CIPK3_ARATH6.271e-3456.80CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPKW_ORYSJ8.191e-3457.60CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKU_ORYSJ1.397e-3353.13CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKX_ORYSJ3.112e-3356.80CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKM_ARATH9.056e-3350.00CBL-interacting serine/threonine-protein kinase 22... [more]
CIPK8_ORYSJ1.183e-3252.94CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
CIPKK_ORYSJ1.545e-3252.94CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPK3_ORYSJ1.545e-3255.20CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CIPK8_ARATH3.441e-3254.40CBL-interacting serine/threonine-protein kinase 8 ... [more]
CIPKO_ORYSJ1.708e-3153.60CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06O06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838544 ID=CF838544; Name=CF838544; organism=Citrus sinensis; type=EST; length=762bp
AACACTCCCGCGTATACACCATCACCATCTATAAGCGTTTGATTAATAGC
AGCAAATCAAAATCCTTATCGTCTCCCCCCAAGAAAAAATAAATAAGCAA
ACACTAAAAGCCCCTTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTTG
AGATTGCCTGAGCTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAA
TTGCCACCGGAAACACGTCGAAGACGGGTGATCCTCAACCACCACCACAA
CACAAAAGAAAACCTGAAAGAATTATTTAATTAGCTAAACTTGGTACATA
TATACATATAAAAGGAAAAAAAGACCGCGTGGAGATGGCTACATCAAACA
GTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACATGGGAAATACGAG
CTGGGGCGTATGTTAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAG
AAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACA
AGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTC
ATGAAGATGGTGAAGCACAAGCACATCGTTGAGCTACACGAAGTCATGGC
AAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCAAAGGCGGCGAGC
TGTTCAACAAGATTGCCAAAGGAAGATTACGAGAAGATGTTGCAAGGGTT
TATTTCCAGCAGCTGATTTCAGCCGTTGATTTCTGCCACAGCCGCGGCGT
TTATCACCGCGA
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