CF838549

Overview
NameCF838549
Unique NameCF838549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 36/124 (29.03%), Postives = 65/124 (52.42%), Query Frame = 3
Query:  426 MDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +D A  +F    +     + +LI GF K  +  EA  L+ +M    + P+  T  A+  +C+ L +L+ G  +HG++ + G E D     S I+MY +C  ++ A  +F  M +++V SW ++I
Sbjct:  262 LDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385          

HSP 2 Score: 73.9442 bits (180), Expect = 1.119e-12
Identity = 52/174 (29.89%), Postives = 81/174 (46.55%), Query Frame = 3
Query:  288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID--EPGAFDFNSLIRGFVKDVK--FEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            LTIL   K L   ++VHA V+  GF       S+L  T A      +D+A S F +I   +     +N+++ G+ K     + + L LYN M       D F      KAC  L  L+ G+ IHG   K G + D +V  SL+ MY +   +E A  +F ++  ++   W  ++
Sbjct:   11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSL--TNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 49/177 (27.68%), Postives = 88/177 (49.72%), Query Frame = 3
Query:  264 LRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 785
            +R  E     +LK+C    +L   +++H  V+K+G+  N    +++V          M  A  +F +I  P    +N ++R +++    +EA+ ++ +M E  V P + T  ++  AC++  AL+ G  IH    KL    D  V  S+ +MY KC+++E A  +F Q   K + SW
Sbjct:  158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR--VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332          

HSP 2 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 45/172 (26.16%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  294 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE-PGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            IL  C  + +    K+ H  + + G+  N   A+ L+        G++  A   FRQ+ E      +N+L+ G  +  + E+AL  +  M +   +P  +T   L   CA + AL  G  IHG + + G++ D+ ++ ++++MY KC   ++A  +FK+   + +  W +II
Sbjct:  401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM--YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSII 569          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 3
Query:  261 NLRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ-IDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVE-PDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            NL+  +     IL +C  L   E  K++H  V++     N    S L+A    S    M+ +  IF   I+E     +NS+I GF  ++   +AL L+  M +  V  P+  +F  +  +C++L +L  G Q HG V K G+  D FV+ +L +MY KC +++ A   F  + +K+   W  +I
Sbjct:  411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV--YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592          

HSP 2 Score: 75.8702 bits (185), Expect = 2.944e-13
Identity = 41/148 (27.70%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  357 GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQ-MDQKSVASWRAII 797
            GF  N     +++  C  S  G ++    IF  I +P    +N+++ G+     +EEA+  + +M  + ++PD  T   +  +CA+L+ L+ G QIHG V +     +  + + LI +Y +CEK+E +  IF   +++  +A W ++I
Sbjct:  345 GFQPNEVTCISVLGACFRS--GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490          

HSP 3 Score: 75.0998 bits (183), Expect = 5.021e-13
Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  360 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCE-KVEFASAIFKQMDQKSVASWRAII 797
            + WN F    L   C +   G +  AC +F  + E     +N++I   V+    E+AL +Y  M   G  P  FT  ++  AC+K+     GM+ HG   K G + ++FV N+L++MY KC   V++   +F+ + Q +  S+ A+I
Sbjct:   73 YSWNAF----LTFRCKV---GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212          

HSP 4 Score: 69.3218 bits (168), Expect = 2.755e-11
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 3
Query:  330 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDH------FTFPALFKACAKLQAL---KEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            + H   +K G   N F  + L++  A   +  +DY   +F  + +P    + ++I G  ++ K  EA+ ++  M E+GV+ D        +  A  + C  L  +   + G QIH    +LGF  DL + NSL+ +Y K + +  A  IF +M + +V SW  +I
Sbjct:  159 RCHGVAVKTGLDKNIFVGNALLSMYAKCGF-IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.254e-13
Identity = 38/126 (30.16%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G +  A  +F ++ +     +N++I G ++    EE L L+ EM   G  PD +T  ++F   A L+++  G QIHG+  K G E DL V +SL +MY +  K++    + + M  +++ +W  +I
Sbjct:  124 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 249          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP127_ARATH (Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.254e-13
Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3
Query:  357 GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G+ WN       V     +  G +  A  +F  + E      NSL+ G++ +   EEAL L+ E+       D  T   + KACA+L+ALK G QIH  +   G E D  + +SL+N+Y KC  +  AS + +Q+ +    S  A+I
Sbjct:  124 GYSWN-------VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALI 260          

HSP 2 Score: 74.3294 bits (181), Expect = 8.565e-13
Identity = 70/238 (29.41%), Postives = 101/238 (42.44%), Query Frame = 3
Query:  156 LINNGVDSSSMTRTSVLHQSLLLTQPEEPPK-GPELNLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP----------------------GAFD---------FNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMD 764
            L N   +   +T  S+LH  +L    EE  +   ELN         T+LK C  LE  K   ++HA +L  G   +    S+LV   A    G +  A  +  QI EP                      G FD         +NS+I G++ +    EAL L+NEM     E D  T  A+  AC  L  L+ G Q+H H  K G   D+ V ++L++MY KC     A  +F +++
Sbjct:  146 LFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC--GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE 380          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.944e-13
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGV-EPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G M  A  +F +I  P    +NS+I G  ++   E+A+ +Y  +       PD +TF A   A A+ +    G  +HG V KLG+E  +FV  +L++MY K  + E A  +F  M ++ V  W  +I
Sbjct:  349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475          

HSP 2 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 44/172 (25.58%), Postives = 87/172 (50.58%), Query Frame = 3
Query:  291 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            ++++ C  LE+      +++ ++K G+  N    ++++     S  G ++ A  IF  ++   A  +N++I G +K+ K E+ L  +  M   GV+P  FT+  +   C+KL +   G  IH  +       DL + N+L++MY  C  +  A  +F ++   ++ SW +II
Sbjct:  204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGM--YSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373          

HSP 3 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 43/165 (26.06%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  315 LEEFKKVHAHVLKWGF---FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALF-LYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            L+  +++HA VL  G      +P+  +NL++       GS++ A  +F ++       +N+L   + ++  F    F L   M    V+P+  TF +L + CA L+ +  G  ++  + KLG+  ++ VQ S++ MY  C  +E A  IF  ++ +   +W  +I
Sbjct:  110 LKRARQIHALVLTAGAGAATESPYANNNLISMYV--RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR23_ARATH (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 41/174 (23.56%), Postives = 84/174 (48.28%), Query Frame = 3
Query:  276 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            E++ L +L          ++HAH+L+     +    ++ ++ C      + DYA  +F  I  P    FN++I+ +       E+L  ++ M  RG+  D +T+  L K+C+ L  L+ G  +HG + + GF     ++  ++ +Y    ++  A  +F +M +++V  W  +I
Sbjct:    4 ERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICG--SLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMI 175          

HSP 2 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  342 HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLG-FEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +V+ W      FC S           G ++    +F+Q+ E     +NS+I    K  +  EAL L+ EM ++G +PD  T   +    A L  L  G  IH      G F+  + V N+L++ Y K   +E A+AIF++M +++V SW  +I
Sbjct:  167 NVVVWNLMIRGFCDS-----------GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI 308          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP427_ARATH (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            K++H   LK G   N F +  L+     S  G ++ A   F  + E     +N++I G+      EEAL L  +M + GV  D FT   + +   KL  L+   Q H  + + GFE ++    +L++ Y K  +V+ A  +F ++ +K++ SW A++
Sbjct:  244 KQLHVCALKLGVVDNTFVSCGLIDM--YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALM 398          

HSP 2 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  309 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH--WGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            K++   K+V+  ++  GF    +  + ++    L H   G +  A  +F +I E   + + S+I GFV    + EA  L+  M+E   + +  TF  + +A A L ++  G Q+H    KLG   + FV   LI+MY KC  +E A   F+ M +K+  +W  +I
Sbjct:  137 KSIRCVKRVYGFMMSNGFEPEQYMMNRIL----LMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVI 297          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP144_ARATH (Pentatricopeptide repeat-containing protein At2g02750 OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.845e-13
Identity = 47/171 (27.49%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  291 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFE-RGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWRAII 797
            ++L  C ++E   ++H   +K GF    +  ++LV+    S  G    A  +F ++       +N+ I G +++        ++N M +    EP+  TF     ACA L  L+ G Q+HG V K  F+++  V  +LI+MY KC   + A  +F ++ D +++ SW ++I
Sbjct:  137 SVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSM--YSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305          

HSP 2 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 3
Query:  420 GSMDYACSIFRQID----EPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 770
            G  + A  +F ++D    +P +  +NSLI GF +  K  EA   +  M    + P      +L  AC+ +  LK G +IHGHV K   E D+FV  SLI+MY KC    +A  IF + + K
Sbjct:  312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432          

HSP 3 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 45/171 (26.32%), Postives = 87/171 (50.88%), Query Frame = 3
Query:  294 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            +LK+C  L +  +   +HA V+K GFF + F A+ LV+         +  A  +  ++ E G    N+ + G +++    +A  ++ +    G   +  T  ++   C  ++    GMQ+H    K GFE +++V  SL++MY +C +   A+ +F+++  KSV ++ A I
Sbjct:   37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVS--MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202          
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.558e-13
Identity = 40/126 (31.75%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797
            G +  A ++F ++ +     + ++I G+ +     EAL L+ +M   G   +  +F +    CA + AL+ G Q+HG + K G+E   FV N+L+ MY KC  +E A+ +FK+M  K + SW  +I
Sbjct:  357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482          
The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
PPR14_ARATH1.321e-1329.03Pentatricopeptide repeat-containing protein At1g06... [more]
PP256_ARATH1.321e-1327.68Pentatricopeptide repeat-containing protein At3g26... [more]
PP329_ARATH1.726e-1329.89Pentatricopeptide repeat-containing protein At4g20... [more]
PP198_ARATH2.254e-1330.16Pentatricopeptide repeat-containing protein At2g41... [more]
PP127_ARATH2.254e-1331.97Putative pentatricopeptide repeat-containing prote... [more]
PP277_ARATH2.944e-1332.28Pentatricopeptide repeat-containing protein At3g50... [more]
PPR23_ARATH3.845e-1323.56Pentatricopeptide repeat-containing protein At1g09... [more]
PP427_ARATH3.845e-1328.66Pentatricopeptide repeat-containing protein At5g50... [more]
PP144_ARATH3.845e-1327.49Pentatricopeptide repeat-containing protein At2g02... [more]
PP301_ARATH6.558e-1331.75Pentatricopeptide repeat-containing protein At4g02... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06O11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bp
CTGACATACTTTCTTCTGGCTGAAATTCTTTCTCAATTCTCATGGATGAC
ATTCCATTCTTTCTCAAAGTCATGTACTTTTCATGCTCCTTCAGTTCTTC
CCATTTCACTAAAACTTGCAGTTGATTGATGCTTTGCCGAGAACAACAAT
CTTGATTGATAAATAATGGTGTGGATAGCAGCAGCATGACTAGGACGTCT
GTCCTTCACCAGTCCCTTCTCTTGACACAACCTGAAGAACCACCAAAAGG
CCCTGAGCTCAATCTGAGGTTGAAGGAACAAGAATGTTTAACAATATTGA
AGACATGCAAGAACCTGGAAGAATTCAAGAAAGTTCATGCCCATGTCCTG
AAATGGGGTTTCTTTTGGAACCCTTTTTGTGCAAGCAATCTTGTGGCAAC
TTGTGCTCTCTCACACTGGGGCAGCATGGACTACGCCTGCTCAATTTTTC
GACAAATCGATGAACCAGGTGCTTTTGATTTCAATTCTTTGATTAGAGGA
TTTGTTAAGGATGTAAAGTTTGAGGAAGCTTTGTTTCTTTATAATGAGAT
GTTTGAGAGAGGAGTGGAACCTGATCATTTCACATTTCCAGCCCTTTTCA
AGGCATGTGCTAAGTTACAAGCATTGAAAGAGGGAATGCAAATTCATGGG
CATGTATTTAAGCTGGGATTTGAATATGATTTGTTTGTACAGAATTCTTT
AATCAATATGTATGGCAAGTGTGAGAAGGTAGAGTTTGCTTCTGCTATTT
TTAAGCAAATGGATCAAAAGAGTGTTGCTTCTTGGAGGGCTATCATT
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